BLASTX nr result

ID: Cnidium21_contig00034451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034451
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE54312.1| transcription factor DcMYB1 [Daucus carota]           380   e-103
dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana...   267   2e-69
gb|ABU53925.1| myb-related transcription factor [Datura metel]        267   2e-69
dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana...   266   3e-69
ref|NP_001234262.1| myb-related transcription factor [Solanum ly...   264   1e-68

>dbj|BAE54312.1| transcription factor DcMYB1 [Daucus carota]
          Length = 233

 Score =  380 bits (976), Expect = e-103
 Identities = 187/236 (79%), Positives = 207/236 (87%), Gaps = 1/236 (0%)
 Frame = +3

Query: 3   PCCE-MGVKKGPWSSEEDQILISYIQQNGHGNWRALPKLAGLLRCGKSCRLRWLNYLRPD 179
           PCCE MG+KKGPWSSEEDQILIS+IQQNGHGNWRALPKLAGLLRCGKSCRLRW+NYLRPD
Sbjct: 5   PCCEKMGLKKGPWSSEEDQILISFIQQNGHGNWRALPKLAGLLRCGKSCRLRWINYLRPD 64

Query: 180 IKRGDFSKDEEETIIQLHQKLGNRWAAIAARLPGRTDNEIKNVWHTRLKKNLKNYDQFTR 359
           IKRG+FSK+EEETII+LHQKLGN+WAAIAA+LPGRTDNEIKNVWHT LKK LKNY     
Sbjct: 65  IKRGNFSKEEEETIIELHQKLGNKWAAIAAKLPGRTDNEIKNVWHTHLKKKLKNY----- 119

Query: 360 DQVEKESNVKMQVDSENRRNSPQHSASELSSVTDSLAMARRIVKSEQIMESSESSKIPEI 539
           DQV+ ESNVKMQV+SENRRNSPQHS SELSSVTDS A A+ ++KSEQ  E SESSKIPEI
Sbjct: 120 DQVKNESNVKMQVESENRRNSPQHSTSELSSVTDSSAKAKCVIKSEQNTELSESSKIPEI 179

Query: 540 DQSFWYEGLGLDNQNTGFPGIEEFQEFQDSGNVDAEMDFWDNLFSGAGELQDLPEF 707
           D SFW E   ++NQ+ G PGI   +EFQ+SGNVDAEMDFW NLFSGA + +DLPEF
Sbjct: 180 DASFWSEEFTINNQDKGVPGI--IEEFQESGNVDAEMDFWCNLFSGAEDFKDLPEF 233


>dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana tabacum]
          Length = 281

 Score =  267 bits (682), Expect = 2e-69
 Identities = 146/278 (52%), Positives = 181/278 (65%), Gaps = 43/278 (15%)
 Frame = +3

Query: 3   PCCE-MGVKKGPWSSEEDQILISYIQQNGHGNWRALPKLAGLLRCGKSCRLRWLNYLRPD 179
           PCCE MG+KKGPW+ EEDQIL+SYIQ NGHGNWRALPKLAGLLRCGKSCRLRW NYLRPD
Sbjct: 5   PCCEKMGLKKGPWTPEEDQILVSYIQTNGHGNWRALPKLAGLLRCGKSCRLRWTNYLRPD 64

Query: 180 IKRGDFSKDEEETIIQLHQKLGNRWAAIAARLPGRTDNEIKNVWHTRLKKNLKNYDQFTR 359
           IKRG+F+++EE++IIQLH+ LGNRW+AIAARLPGRTDNEIKNVWHT LKK LKNY     
Sbjct: 65  IKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQN 124

Query: 360 DQVEKESNVKMQVDSENRR---------------------NSPQHSASELSSVT-DSLAM 473
            +   ++N+  +  S ++                      NSPQ S+SE+S+VT DS AM
Sbjct: 125 SKRHSKNNLDSKAPSTSQTFNNSDNFSNIQEDINGPVTGPNSPQRSSSEMSTVTVDSTAM 184

Query: 474 A------RRIVKSEQIMESSESSKIPEIDQSFWYEGLGLDNQNT------------GFPG 599
                  + + K    M+SSE+  IPEID+SFW + L   + +T             FP 
Sbjct: 185 TTITIDDQNMFKQLDEMDSSENF-IPEIDESFWTDDLSTSDNSTFGMEGTGGELQVQFPF 243

Query: 600 IEEFQEFQD--SGNVDAEMDFWDNLFSGAGELQDLPEF 707
               QE  D     ++ +MDFW N+F  +G+L DLPEF
Sbjct: 244 SSVKQESMDMVGAKLEDDMDFWYNVFIKSGDLLDLPEF 281


>gb|ABU53925.1| myb-related transcription factor [Datura metel]
          Length = 278

 Score =  267 bits (682), Expect = 2e-69
 Identities = 148/275 (53%), Positives = 178/275 (64%), Gaps = 40/275 (14%)
 Frame = +3

Query: 3   PCCE-MGVKKGPWSSEEDQILISYIQQNGHGNWRALPKLAGLLRCGKSCRLRWLNYLRPD 179
           PCCE MG+KKGPW+ EEDQILISYIQ NGHGNWRALPKLAGLL+CGKSCRLRW NYLRPD
Sbjct: 5   PCCEKMGLKKGPWTPEEDQILISYIQSNGHGNWRALPKLAGLLKCGKSCRLRWTNYLRPD 64

Query: 180 IKRGDFSKDEEETIIQLHQKLGNRWAAIAARLPGRTDNEIKNVWHTRLKKNLKNY----- 344
           IKRG+F+++EE++IIQLH+ LGNRW+AIAARLPGRTDNEIKNVWHT LKK LKNY     
Sbjct: 65  IKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQT 124

Query: 345 ----------------DQFTRDQVEKESNVKMQVDSEN-RRNSPQHSASELSSVT-DSLA 470
                            Q         SN++  ++      NSPQ S+SE+S+VT DSLA
Sbjct: 125 SKRHCKNNNDSKAPSTSQIALKSSHNFSNIQEDINGPGPGPNSPQRSSSEMSTVTADSLA 184

Query: 471 MARRIVKSEQIMESSESSKIPEIDQSFWYEGLG-LDNQNTGFPGI--EEFQ--------- 614
           +   I      M+SSE+  IPEID+SFW + L   DN N    G   EE Q         
Sbjct: 185 VTMGITNGGGHMDSSENF-IPEIDESFWTDDLSTADNSNFNMVGSGGEELQVQFPFHAMK 243

Query: 615 ----EFQDSGNVDAEMDFWDNLFSGAGELQDLPEF 707
               E      ++ +MDFW N+F  +G+L +LPEF
Sbjct: 244 QESVEMDVGAKLEDDMDFWYNVFIKSGDLLELPEF 278


>dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana tabacum]
          Length = 281

 Score =  266 bits (681), Expect = 3e-69
 Identities = 144/277 (51%), Positives = 179/277 (64%), Gaps = 42/277 (15%)
 Frame = +3

Query: 3   PCCE-MGVKKGPWSSEEDQILISYIQQNGHGNWRALPKLAGLLRCGKSCRLRWLNYLRPD 179
           PCCE MG+KKGPW+ EEDQ+L+SYIQ NGHGNWRALPKLAGLLRCGKSCRLRW NYLRPD
Sbjct: 5   PCCEKMGLKKGPWTPEEDQVLVSYIQTNGHGNWRALPKLAGLLRCGKSCRLRWTNYLRPD 64

Query: 180 IKRGDFSKDEEETIIQLHQKLGNRWAAIAARLPGRTDNEIKNVWHTRLKKNLKNYDQFTR 359
           IKRG+F+++EE++IIQLH+ LGNRW+AIAARLPGRTDNEIKNVWHT LKK LKNY     
Sbjct: 65  IKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQN 124

Query: 360 DQVEKESNVKMQVDSENRR---------------------NSPQHSASELSSVT-DSLAM 473
            +   ++N+  +  S ++                      NSPQ S+SE+S+VT DS AM
Sbjct: 125 SKKHSKNNLDSKAPSTSQTFNNSDNFSNIQEDINGPVTGPNSPQRSSSEMSTVTADSTAM 184

Query: 474 ARRIVKSEQIME-----SSESSKIPEIDQSFWYEGL------GLDNQNTG------FPGI 602
               +  + + +     +S  S IPEID+SFW   L        D + TG      FP  
Sbjct: 185 TTITIDDQNMFKQLDEMNSSESFIPEIDESFWTNDLSTGDNSNFDMEGTGEELQVQFPFS 244

Query: 603 EEFQEFQD--SGNVDAEMDFWDNLFSGAGELQDLPEF 707
              QE  D     ++ +MDFW N+F  +G+L DLPEF
Sbjct: 245 SVKQESMDMVGTKLEDDMDFWYNVFIKSGDLLDLPEF 281


>ref|NP_001234262.1| myb-related transcription factor [Solanum lycopersicum]
           gi|1370140|emb|CAA66952.1| THM18 [Solanum lycopersicum]
          Length = 265

 Score =  264 bits (675), Expect = 1e-68
 Identities = 138/262 (52%), Positives = 174/262 (66%), Gaps = 27/262 (10%)
 Frame = +3

Query: 3   PCCE-MGVKKGPWSSEEDQILISYIQQNGHGNWRALPKLAGLLRCGKSCRLRWLNYLRPD 179
           PCCE MG+KKGPW+ +ED ILISYIQ NGH NWRALPKLAGLLRCGKSCRLRW NYLRPD
Sbjct: 5   PCCEKMGLKKGPWTPQEDNILISYIQNNGHSNWRALPKLAGLLRCGKSCRLRWTNYLRPD 64

Query: 180 IKRGDFSKDEEETIIQLHQKLGNRWAAIAARLPGRTDNEIKNVWHTRLKKNLKNYDQ--- 350
           IKRG+F+K+EE+TII+LH+ LGNRW+AIAARLPGRTDNEIKN+WHT LKK LKNY     
Sbjct: 65  IKRGNFTKEEEDTIIKLHENLGNRWSAIAARLPGRTDNEIKNIWHTNLKKKLKNYQPCQN 124

Query: 351 ----------FTRDQVEKESNVKMQVDSENRR------NSPQHSASELSSVTDSLAMARR 482
                       +     ES+    + +  ++      NSPQ S+SE+SSVT  +   + 
Sbjct: 125 SKRHSKTSHVSNKGPTTSESSNNSDLSTSTKQHIKIAPNSPQLSSSEMSSVTLVVDDNQM 184

Query: 483 IVKSEQIMESSESSKIPEIDQSFWYEGLGLDNQNTGFPGIEEFQE-------FQDSGNVD 641
           ++  E+ +ESS S   P+ID+SFW + L  +N N      +E Q        F  S  ++
Sbjct: 185 VIIKEEKIESSSSEYFPKIDESFWADELSTEN-NMIIGHDQEIQVREENVDIFTTSSKME 243

Query: 642 AEMDFWDNLFSGAGELQDLPEF 707
            +MDFW N+F   G+L +LPEF
Sbjct: 244 EDMDFWYNVFIKTGDLPELPEF 265


Top