BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034417
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   119   3e-25
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...    81   2e-20
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    94   1e-17
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    94   2e-17
ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group] g...    93   3e-17

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/128 (52%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
 Frame = -3

Query: 378 GVKGCMAMKLDMSKASGMVIY*RND---VKDGF**NICKAGHEMLVSVSYSILYNGFPST 208
           G KG + +KLDMSKA   V +   +   +K GF     K     + S  +S+L NG PS 
Sbjct: 575 GKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPSR 634

Query: 207 NFKPRRGLQQGDPLSPFLFHICAEGFSALLRDAESQKSIHGVKLARNVALISYLFFVDYT 28
           NF P RGL+QGDPLSPFLF +CAEG S LLRDAE +K IHGVK+   V+ IS+LFF D +
Sbjct: 635 NFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDS 694

Query: 27  LLFTRASD 4
           LLF RA++
Sbjct: 695 LLFIRATE 702


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score = 80.9 bits (198), Expect(2) = 2e-20
 Identities = 38/82 (46%), Positives = 55/82 (67%)
 Frame = -3

Query: 255 LVSVSYSILYNGFPSTNFKPRRGLQQGDPLSPFLFHICAEGFSALLRDAESQKSIHGVKL 76
           + +VSY I  NG  +    P+RG +QGDPLSP+LF +CAEG SA+L+ AE+   I G+K+
Sbjct: 34  VTTVSYRINVNGEYTDQIVPKRGSRQGDPLSPYLFILCAEGLSAMLQSAENAGKIEGIKI 93

Query: 75  ARNVALISYLFFVDYTLLFTRA 10
            R    +++LFF D +L+  RA
Sbjct: 94  CRGAPRVNHLFFADDSLMLMRA 115



 Score = 42.7 bits (99), Expect(2) = 2e-20
 Identities = 14/29 (48%), Positives = 26/29 (89%)
 Frame = -1

Query: 335 RVEWSFIEGMMLKMGFNETFVKLVMRCLS 249
           RVEW+F++GMM K+GF++ ++ L+M+C++
Sbjct: 7   RVEWTFLQGMMRKLGFHDKWIHLIMKCVT 35


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
 Frame = -3

Query: 369 GCMAMKLDMSKASGMVIY*---RNDVKDGF**NICKAGHEMLVSVSYSILYNGFPSTNFK 199
           G  A+KLDMSKA   V +    R   K GF           + SVS++   NG    +  
Sbjct: 572 GVCALKLDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVNGVVEGSLS 631

Query: 198 PRRGLQQGDPLSPFLFHICAEGFSALLRDAESQKSIHGVKLARNVALISYLFFVDYTLLF 19
           P RGL+QGDP+SP+LF +CA+ FS LL  A S+K IHG ++ R   ++S+LFF D ++LF
Sbjct: 632 PSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILF 691

Query: 18  TRAS 7
           T+AS
Sbjct: 692 TKAS 695


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 56/124 (45%), Positives = 76/124 (61%), Gaps = 3/124 (2%)
 Frame = -3

Query: 363  MAMKLDMSKASGMVIY*---RNDVKDGF**NICKAGHEMLVSVSYSILYNGFPSTNFKPR 193
            +A+KLDM+KA   V +    R     GF         + + SV+YS+L  G P    KP 
Sbjct: 859  IALKLDMTKAYDRVEWGFLQRMMEVMGFPDRFVFLIMDCVKSVTYSVLLQGAPFGKIKPS 918

Query: 192  RGLQQGDPLSPFLFHICAEGFSALLRDAESQKSIHGVKLARNVALISYLFFVDYTLLFTR 13
            RGL+QGDP+SP+LF I AEG SAL+R AE ++ IHGV +AR    +S+LF+ D +LLF  
Sbjct: 919  RGLRQGDPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFCD 978

Query: 12   ASDT 1
            A+ T
Sbjct: 979  ATVT 982


>ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group]
            gi|255676397|dbj|BAH93171.1| Os05g0434000 [Oryza sativa
            Japonica Group]
          Length = 1478

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/127 (44%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
 Frame = -3

Query: 381  KGVKGCMAMKLDMSKASGMVIY*---RNDVKDGF**NICKAGHEMLVSVSYSILYNGFPS 211
            KG  G  A+KLDMSKA   V +       ++ GF         + + SV+Y I  NG  S
Sbjct: 913  KGKNGVAAIKLDMSKAYDRVEWDFLRHMMLRLGFHDQWVNLVMKCVTSVTYRIKINGEHS 972

Query: 210  TNFKPRRGLQQGDPLSPFLFHICAEGFSALLRDAESQKSIHGVKLARNVALISYLFFVDY 31
                P+RGL+QGDPLSP+LF ICAEG SALL+ A++   I G+K+ R+   I++LFF D 
Sbjct: 973  DQIYPQRGLRQGDPLSPYLFIICAEGLSALLQKAQADGKIEGIKVCRDTPRINHLFFADD 1032

Query: 30   TLLFTRA 10
            +L+  RA
Sbjct: 1033 SLVLMRA 1039