BLASTX nr result

ID: Cnidium21_contig00034407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034407
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003577391.1| PREDICTED: uncharacterized protein LOC100845...   147   9e-34
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   147   9e-34
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   147   1e-33
ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244...   146   2e-33
ref|NP_001067267.1| Os12g0614000 [Oryza sativa Japonica Group] g...   146   2e-33

>ref|XP_003577391.1| PREDICTED: uncharacterized protein LOC100845126 [Brachypodium
           distachyon]
          Length = 205

 Score =  147 bits (371), Expect = 9e-34
 Identities = 78/144 (54%), Positives = 97/144 (67%), Gaps = 1/144 (0%)
 Frame = -3

Query: 515 KFGRGPREFGGSVDLIKQCKLWPHHEFFCKRPLPVEISETRYFQNVVGEVKIEKGEGMEL 336
           KFG GPRE  G+VDLI Q KL PHH+FFCKRPLP+ IS+T Y  NVVG+ +I KGEGMEL
Sbjct: 7   KFGTGPRELTGAVDLISQYKLQPHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMEL 66

Query: 335 DQLLQNASAVENRHPDLHPFDMSILTEAFKMRETSHADLSYAEKGNGRKMFELKGDSID- 159
           DQL+QNA  + ++   + PFDM  L +AF++RET+  DL  AEKG      + K +S D 
Sbjct: 67  DQLIQNA-YLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEKGVPTISGKSKSESKDK 125

Query: 158 NKKRGKHKIRDKDKSMDFTRRHHQ 87
            KK  KHK RDKDK     +  H+
Sbjct: 126 EKKHKKHKDRDKDKEHKKHKHRHK 149


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/144 (50%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
 Frame = -3

Query: 515 KFGRGPREFGGSVDLIKQCKLWPHHEFFCKRPLPVEISETRYFQNVVGEVKIEKGEGMEL 336
           KFG GPRE  G+VDLI   KL PH+EFFCKR LPV I++T Y  NVVG+ +I KG+GM+L
Sbjct: 7   KFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRKGDGMQL 66

Query: 335 DQLLQNASAVENRHPDLHPFDMSILTEAFKMRETSHADLSYAEKGNGRKMFELKGDSID- 159
           +QL+QN S+  + +  + PFD+ +L EAF++RET+  DL  AEKG      + KG++ D 
Sbjct: 67  EQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAGKSKGENKDK 126

Query: 158 NKKRGKHKIRDKDKSMDFTRRHHQ 87
            KK  KHK +DKDK  D   + H+
Sbjct: 127 EKKHKKHKDKDKDKDKDREHKKHK 150


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  147 bits (370), Expect = 1e-33
 Identities = 74/146 (50%), Positives = 96/146 (65%), Gaps = 1/146 (0%)
 Frame = -3

Query: 521 DTKFGRGPREFGGSVDLIKQCKLWPHHEFFCKRPLPVEISETRYFQNVVGEVKIEKGEGM 342
           D KFGRGPRE  G+VDLI   KL PHH+FFCK+ LP+ IS+T Y  NVVG+ +I KGEGM
Sbjct: 5   DKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGM 64

Query: 341 ELDQLLQNASAVENRHPDLHPFDMSILTEAFKMRETSHADLSYAEKGNGRKMFELKGDSI 162
           +L+QL+QN S     +  + PFD  IL EAF++RET   DL  AEKG      + K +S 
Sbjct: 65  QLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESK 124

Query: 161 D-NKKRGKHKIRDKDKSMDFTRRHHQ 87
           D ++K  KHK RDK+K  +  +  H+
Sbjct: 125 DKDRKHKKHKDRDKEKDREHKKHKHR 150


>ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244629 [Vitis vinifera]
           gi|297740784|emb|CBI30966.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  146 bits (368), Expect = 2e-33
 Identities = 78/146 (53%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
 Frame = -3

Query: 515 KFGRGPREFGGSVDLIKQCKLWPHHEFFCKRPLPVEISETRYFQNVVGEVKIEKGEGMEL 336
           KFG+GPRE  G+VDLI   KL PHHEFFCKR LP+ ISET Y ++VVG  +I KGEGMEL
Sbjct: 7   KFGKGPRELSGAVDLINHYKLLPHHEFFCKRSLPLSISETHYLRSVVGGTEIRKGEGMEL 66

Query: 335 DQLLQNASAVENRHPDLHPFDMSILTEAFKMRETSHADLSYAEKGNGRKMFELKGDSIDN 156
           DQL  +   +  R+  +HPFD+ IL EAF+MRET+  +LS AEKG    + + K +  D 
Sbjct: 67  DQLFHSTFYLRERNAGIHPFDLDILREAFQMRETTPVELSSAEKGIPTCVPKSKNEPKD- 125

Query: 155 KKRGKHKIRDKDKSMDFTR-RHHQKN 81
            K  KHK + KDK+ D  + RHH K+
Sbjct: 126 -KERKHK-KSKDKAKDRKKHRHHPKD 149


>ref|NP_001067267.1| Os12g0614000 [Oryza sativa Japonica Group]
           gi|113649774|dbj|BAF30286.1| Os12g0614000, partial
           [Oryza sativa Japonica Group]
          Length = 231

 Score =  146 bits (368), Expect = 2e-33
 Identities = 75/146 (51%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
 Frame = -3

Query: 521 DTKFGRGPREFGGSVDLIKQCKLWPHHEFFCKRPLPVEISETRYFQNVVGEVKIEKGEGM 342
           D KFG+GPRE  G+VDLI   KL  HH+FFCK+PLP+ IS+T Y  NVVG+ +I KGEGM
Sbjct: 16  DKKFGKGPRELTGAVDLISHYKLLAHHDFFCKKPLPLAISDTHYLDNVVGDTEIRKGEGM 75

Query: 341 ELDQLLQNASAVENRHPDLHPFDMSILTEAFKMRETSHADLSYAEKGNGRKMFELKGDSI 162
           ELDQL+QNA  + ++   + PFDM  L +AF++RET+  DL  AEKG      +LK +S 
Sbjct: 76  ELDQLVQNA-YLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEKGIPTISGKLKSESK 134

Query: 161 D-NKKRGKHKIRDKDKSMDFTRRHHQ 87
           D  KK  KHK +D+DK  +  +  H+
Sbjct: 135 DKEKKHKKHKDKDRDKDKEHKKHKHR 160


Top