BLASTX nr result

ID: Cnidium21_contig00034385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034385
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABP57378.1| GNOM-like 1 protein [Nicotiana tabacum]                159   2e-37
ref|XP_002530015.1| pattern formation protein, putative [Ricinus...   159   3e-37
ref|NP_198766.1| protein GNOM-like 1 [Arabidopsis thaliana] gi|7...   158   5e-37
ref|XP_002870776.1| hypothetical protein ARALYDRAFT_494037 [Arab...   158   5e-37
ref|XP_003544196.1| PREDICTED: pattern formation protein EMB30-l...   146   2e-33

>gb|ABP57378.1| GNOM-like 1 protein [Nicotiana tabacum]
          Length = 1442

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/117 (66%), Positives = 96/117 (82%)
 Frame = -2

Query: 352 LMGCLSDQSKIHSFGRGFDGCSSRPSGGAFALTVNSEIGAVLAVMRRNVRWGVNYMAEDD 173
           +MGCL+ QS++++      G + +PS GA    VNSEIGAVLAVMRRNVRWG  Y AEDD
Sbjct: 1   MMGCLNQQSEVNTPISEPKGYTLKPSRGALECMVNSEIGAVLAVMRRNVRWGFRYAAEDD 60

Query: 172 QPEHSLIHSFKELRKKIFMWQNQWRTINPVLYLKPFLDVIQSDETGAPITGVALSSV 2
           Q E+SLI SF ELRKKIF+W+++W +++P+LYL+PFLDVIQSDETGAPITGVALSSV
Sbjct: 61  QLEYSLIQSFTELRKKIFLWRHEWNSVDPLLYLQPFLDVIQSDETGAPITGVALSSV 117


>ref|XP_002530015.1| pattern formation protein, putative [Ricinus communis]
           gi|223530494|gb|EEF32377.1| pattern formation protein,
           putative [Ricinus communis]
          Length = 1450

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/116 (68%), Positives = 94/116 (81%)
 Frame = -2

Query: 349 MGCLSDQSKIHSFGRGFDGCSSRPSGGAFALTVNSEIGAVLAVMRRNVRWGVNYMAEDDQ 170
           MG L+ QS+I+SF R F  C    + GA A  VNSEIGAVLAVMRRNVRWGV Y+ +DDQ
Sbjct: 1   MGHLNLQSEINSFQREFCDCPVISTKGAVACMVNSEIGAVLAVMRRNVRWGVRYVTDDDQ 60

Query: 169 PEHSLIHSFKELRKKIFMWQNQWRTINPVLYLKPFLDVIQSDETGAPITGVALSSV 2
            EH+LIHS KELRK+IF WQ++W +I+P +YL+PFLDVI SDETGAPITGVALSSV
Sbjct: 61  LEHTLIHSLKELRKQIFSWQHKWHSIDPAIYLQPFLDVICSDETGAPITGVALSSV 116


>ref|NP_198766.1| protein GNOM-like 1 [Arabidopsis thaliana]
           gi|75171562|sp|Q9FLY5.1|GNL1_ARATH RecName: Full=ARF
           guanine-nucleotide exchange factor GNL1; AltName:
           Full=Protein ENDOPLASMIC RETICULUM MORPHOLOGY 1;
           AltName: Full=Protein GNOM-like 1
           gi|10177699|dbj|BAB11025.1| pattern formation protein
           [Arabidopsis thaliana] gi|332007058|gb|AED94441.1|
           protein GNOM-like 1 [Arabidopsis thaliana]
          Length = 1443

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/116 (68%), Positives = 92/116 (79%)
 Frame = -2

Query: 349 MGCLSDQSKIHSFGRGFDGCSSRPSGGAFALTVNSEIGAVLAVMRRNVRWGVNYMAEDDQ 170
           MG  +  S  +SF   F  C S+PS GA A  +NSEIGAVLAVMRRNVRWGV Y+A+DDQ
Sbjct: 1   MGYQNHPSGSNSFHGEFKRCHSKPSKGAVASMINSEIGAVLAVMRRNVRWGVRYIADDDQ 60

Query: 169 PEHSLIHSFKELRKKIFMWQNQWRTINPVLYLKPFLDVIQSDETGAPITGVALSSV 2
            EHSLIHS KELRK+IF WQ+ W+ ++P LY++PFLDVI SDETGAPITGVALSSV
Sbjct: 61  LEHSLIHSLKELRKQIFSWQSNWQYVDPRLYIQPFLDVILSDETGAPITGVALSSV 116


>ref|XP_002870776.1| hypothetical protein ARALYDRAFT_494037 [Arabidopsis lyrata subsp.
           lyrata] gi|297316612|gb|EFH47035.1| hypothetical protein
           ARALYDRAFT_494037 [Arabidopsis lyrata subsp. lyrata]
          Length = 1445

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/116 (68%), Positives = 92/116 (79%)
 Frame = -2

Query: 349 MGCLSDQSKIHSFGRGFDGCSSRPSGGAFALTVNSEIGAVLAVMRRNVRWGVNYMAEDDQ 170
           MG  +  S  +SF   F  C S+PS GA A  +NSEIGAVLAVMRRNVRWGV Y+A+DDQ
Sbjct: 1   MGYQNHPSGSNSFHGEFKRCHSKPSKGAVASMINSEIGAVLAVMRRNVRWGVRYIADDDQ 60

Query: 169 PEHSLIHSFKELRKKIFMWQNQWRTINPVLYLKPFLDVIQSDETGAPITGVALSSV 2
            EHSLIHS KELRK+IF WQ+ W+ ++P LY++PFLDVI SDETGAPITGVALSSV
Sbjct: 61  LEHSLIHSLKELRKQIFSWQSNWQYVDPRLYIQPFLDVILSDETGAPITGVALSSV 116


>ref|XP_003544196.1| PREDICTED: pattern formation protein EMB30-like [Glycine max]
          Length = 1472

 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/114 (64%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
 Frame = -2

Query: 340 LSDQSKIHSFGRGFDGCSSR-PSGGAFALTVNSEIGAVLAVMRRNVRWGVNYMAEDDQPE 164
           L  Q+ I +   G   C +  P+    A  +N+EIGAVLAVMRRNVRWGV+YM++DDQ E
Sbjct: 6   LQTQTGISATEEGSGQCEAEYPNKTTVACMINAEIGAVLAVMRRNVRWGVHYMSDDDQLE 65

Query: 163 HSLIHSFKELRKKIFMWQNQWRTINPVLYLKPFLDVIQSDETGAPITGVALSSV 2
           HSL+ S K LR++IF WQNQW  I+P LYL+PFLDVIQSDETGAPITGVALSSV
Sbjct: 66  HSLVQSLKALRRQIFSWQNQWHVISPALYLQPFLDVIQSDETGAPITGVALSSV 119


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