BLASTX nr result

ID: Cnidium21_contig00034375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034375
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272177.2| PREDICTED: vacuolar protein sorting-associat...   229   2e-58
emb|CBI39019.3| unnamed protein product [Vitis vinifera]              229   2e-58
ref|NP_193684.4| protein VPS54 [Arabidopsis thaliana] gi|3341867...   227   1e-57
ref|XP_002869986.1| protein binding protein [Arabidopsis lyrata ...   227   1e-57
dbj|BAM64825.1| hypothetical protein [Beta vulgaris]                  223   2e-56

>ref|XP_002272177.2| PREDICTED: vacuolar protein sorting-associated protein 54-like
           [Vitis vinifera]
          Length = 1041

 Score =  229 bits (585), Expect = 2e-58
 Identities = 122/186 (65%), Positives = 140/186 (75%)
 Frame = -1

Query: 561 DFEIEDGGTFRAACPFSSVGENLVVQEKLSQYLDVVEVHLVKEIALRSNSFFEVQGELEG 382
           DF +E+G TFRAACPF++  ENLV+QEKLSQYLDVVE+HLVKEI+LRSNSFFE QG+L+ 
Sbjct: 158 DFALEEGATFRAACPFTTASENLVLQEKLSQYLDVVELHLVKEISLRSNSFFEAQGQLQD 217

Query: 381 LNLRIVEGCSRIRELKETIRVLDSDLVDYARQIQELSSIRSNMLVLQQKLRLILNVNHXX 202
           LN++IVEGCSRIRELKETIR+LDSDLVD A+QIQEL++ RSN+L LQQKL+LIL VN   
Sbjct: 218 LNVKIVEGCSRIRELKETIRLLDSDLVDSAKQIQELNATRSNLLALQQKLKLILYVNQAL 277

Query: 201 XXXXXXXXXADCAGAXXXXXXXXXXXXXXXXXXLHCFRHLGDHVNGAIDSINSILSAEFM 22
                    ADCAGA                  LHCFRHL D V  +IDSINSILSAEFM
Sbjct: 278 SALKLLIASADCAGALDVTDDLQHLLDGDELTGLHCFRHLRDRVATSIDSINSILSAEFM 337

Query: 21  RTSIQD 4
           R SI D
Sbjct: 338 RASIHD 343


>emb|CBI39019.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score =  229 bits (585), Expect = 2e-58
 Identities = 122/186 (65%), Positives = 140/186 (75%)
 Frame = -1

Query: 561 DFEIEDGGTFRAACPFSSVGENLVVQEKLSQYLDVVEVHLVKEIALRSNSFFEVQGELEG 382
           DF +E+G TFRAACPF++  ENLV+QEKLSQYLDVVE+HLVKEI+LRSNSFFE QG+L+ 
Sbjct: 55  DFALEEGATFRAACPFTTASENLVLQEKLSQYLDVVELHLVKEISLRSNSFFEAQGQLQD 114

Query: 381 LNLRIVEGCSRIRELKETIRVLDSDLVDYARQIQELSSIRSNMLVLQQKLRLILNVNHXX 202
           LN++IVEGCSRIRELKETIR+LDSDLVD A+QIQEL++ RSN+L LQQKL+LIL VN   
Sbjct: 115 LNVKIVEGCSRIRELKETIRLLDSDLVDSAKQIQELNATRSNLLALQQKLKLILYVNQAL 174

Query: 201 XXXXXXXXXADCAGAXXXXXXXXXXXXXXXXXXLHCFRHLGDHVNGAIDSINSILSAEFM 22
                    ADCAGA                  LHCFRHL D V  +IDSINSILSAEFM
Sbjct: 175 SALKLLIASADCAGALDVTDDLQHLLDGDELTGLHCFRHLRDRVATSIDSINSILSAEFM 234

Query: 21  RTSIQD 4
           R SI D
Sbjct: 235 RASIHD 240


>ref|NP_193684.4| protein VPS54 [Arabidopsis thaliana] gi|334186700|ref|NP_849409.2|
           protein VPS54 [Arabidopsis thaliana]
           gi|332658788|gb|AEE84188.1| protein VPS54 [Arabidopsis
           thaliana] gi|332658789|gb|AEE84189.1| protein VPS54
           [Arabidopsis thaliana]
          Length = 1034

 Score =  227 bits (578), Expect = 1e-57
 Identities = 121/187 (64%), Positives = 140/187 (74%)
 Frame = -1

Query: 561 DFEIEDGGTFRAACPFSSVGENLVVQEKLSQYLDVVEVHLVKEIALRSNSFFEVQGELEG 382
           DF +EDG TFR+ACPFSS+ ENL +QEKLSQYLDVVE+HLVKEI++RS+SFFE QG+L+ 
Sbjct: 154 DFALEDGATFRSACPFSSLNENLALQEKLSQYLDVVELHLVKEISVRSDSFFEAQGQLQD 213

Query: 381 LNLRIVEGCSRIRELKETIRVLDSDLVDYARQIQELSSIRSNMLVLQQKLRLILNVNHXX 202
           LN++IVEGCSRIRELKETIR+LD +LVD ARQIQELSS R NML LQ+KLRLIL VN   
Sbjct: 214 LNVKIVEGCSRIRELKETIRLLDRNLVDSARQIQELSSTRINMLELQRKLRLILYVNQAL 273

Query: 201 XXXXXXXXXADCAGAXXXXXXXXXXXXXXXXXXLHCFRHLGDHVNGAIDSINSILSAEFM 22
                    ADCAGA                  L+CFRHL DHV  +IDSINSIL++EFM
Sbjct: 274 SALKLLVASADCAGALDITDDLQNLLAGDELTGLYCFRHLRDHVTSSIDSINSILTSEFM 333

Query: 21  RTSIQDT 1
           R SI DT
Sbjct: 334 RISIHDT 340


>ref|XP_002869986.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315822|gb|EFH46245.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1044

 Score =  227 bits (578), Expect = 1e-57
 Identities = 121/187 (64%), Positives = 140/187 (74%)
 Frame = -1

Query: 561 DFEIEDGGTFRAACPFSSVGENLVVQEKLSQYLDVVEVHLVKEIALRSNSFFEVQGELEG 382
           DF +EDG TFR+ACPFSS+ ENL +QEKLSQYLDVVE+HLVKEI++RS+SFFE QG+L+ 
Sbjct: 154 DFALEDGATFRSACPFSSLNENLALQEKLSQYLDVVELHLVKEISVRSDSFFEAQGQLQD 213

Query: 381 LNLRIVEGCSRIRELKETIRVLDSDLVDYARQIQELSSIRSNMLVLQQKLRLILNVNHXX 202
           LN++IVEGCSRIRELKETIR+LD +LVD ARQIQELSS R NML LQ+KLRLIL VN   
Sbjct: 214 LNVKIVEGCSRIRELKETIRLLDRNLVDSARQIQELSSTRINMLELQRKLRLILYVNQAL 273

Query: 201 XXXXXXXXXADCAGAXXXXXXXXXXXXXXXXXXLHCFRHLGDHVNGAIDSINSILSAEFM 22
                    ADCAGA                  L+CFRHL DHV  +IDSINSIL++EFM
Sbjct: 274 SALKLLVASADCAGALDITDDLQNLLAGDELTGLYCFRHLRDHVTSSIDSINSILTSEFM 333

Query: 21  RTSIQDT 1
           R SI DT
Sbjct: 334 RISIHDT 340


>dbj|BAM64825.1| hypothetical protein [Beta vulgaris]
          Length = 1028

 Score =  223 bits (567), Expect = 2e-56
 Identities = 118/186 (63%), Positives = 137/186 (73%)
 Frame = -1

Query: 561 DFEIEDGGTFRAACPFSSVGENLVVQEKLSQYLDVVEVHLVKEIALRSNSFFEVQGELEG 382
           DFE+EDG TFRAACPFS++ ENLV+QE+LSQYLDVVE+HLVKEI+LRSNSFFE Q +L  
Sbjct: 157 DFELEDGATFRAACPFSTMNENLVLQERLSQYLDVVEMHLVKEISLRSNSFFEAQQQLGD 216

Query: 381 LNLRIVEGCSRIRELKETIRVLDSDLVDYARQIQELSSIRSNMLVLQQKLRLILNVNHXX 202
           LN++IVEGC RIRELKETIR+LD+D+V  AR IQE SS+RSN+L LQQKLRLIL VN   
Sbjct: 217 LNVKIVEGCKRIRELKETIRLLDADVVGSARHIQEFSSMRSNLLSLQQKLRLILYVNQAL 276

Query: 201 XXXXXXXXXADCAGAXXXXXXXXXXXXXXXXXXLHCFRHLGDHVNGAIDSINSILSAEFM 22
                    ADCAGA                  LHCFRHL DHV  ++DSINSILS EF+
Sbjct: 277 GALKLLVASADCAGALDIADDLRQLLDGDELTGLHCFRHLRDHVAASMDSINSILSEEFL 336

Query: 21  RTSIQD 4
           R S+ D
Sbjct: 337 RASLHD 342


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