BLASTX nr result

ID: Cnidium21_contig00034337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034337
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup1...   263   1e-68
ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup1...   263   1e-68
ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1...   260   9e-68
emb|CBI26832.3| unnamed protein product [Vitis vinifera]              260   9e-68
ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicag...   259   2e-67

>ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1486

 Score =  263 bits (671), Expect = 1e-68
 Identities = 117/135 (86%), Positives = 129/135 (95%)
 Frame = -2

Query: 407 SHPYSTHPREWPPLVEVLDTWELPPVLVEKYNAAGGEGTALCGIFPEIRRAWASVDNTLF 228
           SHPYSTHPREWPPLVEV++TWELPPVL+E+YNAAGGEGTA CGIFPEIRRAWASVDN+LF
Sbjct: 44  SHPYSTHPREWPPLVEVVNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLF 103

Query: 227 MWRFDKWDGQCPEFSGEEETICAVGLVKAKPGIFVEAIQYLLILATPVEIILVGVCCSRK 48
           +WRFDKWDGQCPEFSGEE+ ICAVGL K+KPG+FVEAIQYLL+LATPVE+ILVGVCCS  
Sbjct: 104 LWRFDKWDGQCPEFSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGG 163

Query: 47  GDGSDPFAEVSLQPL 3
            DGSDPFAEV+LQPL
Sbjct: 164 ADGSDPFAEVTLQPL 178


>ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1485

 Score =  263 bits (671), Expect = 1e-68
 Identities = 117/135 (86%), Positives = 129/135 (95%)
 Frame = -2

Query: 407 SHPYSTHPREWPPLVEVLDTWELPPVLVEKYNAAGGEGTALCGIFPEIRRAWASVDNTLF 228
           SHPYSTHPREWPPLVEV++TWELPPVL+E+YNAAGGEGTA CGIFPEIRRAWASVDN+LF
Sbjct: 44  SHPYSTHPREWPPLVEVVNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLF 103

Query: 227 MWRFDKWDGQCPEFSGEEETICAVGLVKAKPGIFVEAIQYLLILATPVEIILVGVCCSRK 48
           +WRFDKWDGQCPEFSGEE+ ICAVGL K+KPG+FVEAIQYLL+LATPVE+ILVGVCCS  
Sbjct: 104 LWRFDKWDGQCPEFSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGG 163

Query: 47  GDGSDPFAEVSLQPL 3
            DGSDPFAEV+LQPL
Sbjct: 164 ADGSDPFAEVTLQPL 178


>ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis
           vinifera]
          Length = 1496

 Score =  260 bits (664), Expect = 9e-68
 Identities = 114/135 (84%), Positives = 129/135 (95%)
 Frame = -2

Query: 407 SHPYSTHPREWPPLVEVLDTWELPPVLVEKYNAAGGEGTALCGIFPEIRRAWASVDNTLF 228
           SHPYSTHPREWPPLVEV+DTWELPPVL+E+YNAAGGEGTALCG+FPEIRRAWASVDN+LF
Sbjct: 44  SHPYSTHPREWPPLVEVMDTWELPPVLIERYNAAGGEGTALCGVFPEIRRAWASVDNSLF 103

Query: 227 MWRFDKWDGQCPEFSGEEETICAVGLVKAKPGIFVEAIQYLLILATPVEIILVGVCCSRK 48
           +WRFDKWDGQCPE+SGEE+ ICAVGL K+KPG+FVEAIQYLL+LATPVE+ILVGVCC  +
Sbjct: 104 LWRFDKWDGQCPEYSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCCGR 163

Query: 47  GDGSDPFAEVSLQPL 3
           GDG+DP+ EVSLQ L
Sbjct: 164 GDGTDPYEEVSLQLL 178


>emb|CBI26832.3| unnamed protein product [Vitis vinifera]
          Length = 377

 Score =  260 bits (664), Expect = 9e-68
 Identities = 114/135 (84%), Positives = 129/135 (95%)
 Frame = -2

Query: 407 SHPYSTHPREWPPLVEVLDTWELPPVLVEKYNAAGGEGTALCGIFPEIRRAWASVDNTLF 228
           SHPYSTHPREWPPLVEV+DTWELPPVL+E+YNAAGGEGTALCG+FPEIRRAWASVDN+LF
Sbjct: 44  SHPYSTHPREWPPLVEVMDTWELPPVLIERYNAAGGEGTALCGVFPEIRRAWASVDNSLF 103

Query: 227 MWRFDKWDGQCPEFSGEEETICAVGLVKAKPGIFVEAIQYLLILATPVEIILVGVCCSRK 48
           +WRFDKWDGQCPE+SGEE+ ICAVGL K+KPG+FVEAIQYLL+LATPVE+ILVGVCC  +
Sbjct: 104 LWRFDKWDGQCPEYSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCCGR 163

Query: 47  GDGSDPFAEVSLQPL 3
           GDG+DP+ EVSLQ L
Sbjct: 164 GDGTDPYEEVSLQLL 178


>ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula]
           gi|355524966|gb|AET05420.1| Nuclear pore complex protein
           Nup155 [Medicago truncatula]
          Length = 1484

 Score =  259 bits (661), Expect = 2e-67
 Identities = 117/135 (86%), Positives = 127/135 (94%)
 Frame = -2

Query: 407 SHPYSTHPREWPPLVEVLDTWELPPVLVEKYNAAGGEGTALCGIFPEIRRAWASVDNTLF 228
           SHPYSTHPREWPPLVEV +TWELPPVL+E+YNAAGGEGTA CGIFPEIRRAWASVDN+LF
Sbjct: 44  SHPYSTHPREWPPLVEVANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLF 103

Query: 227 MWRFDKWDGQCPEFSGEEETICAVGLVKAKPGIFVEAIQYLLILATPVEIILVGVCCSRK 48
           +WRFDKWDGQCPE+SGEE+ ICAVGL K+K G+FVEAIQYLLILATPVE+ILVGVCCS  
Sbjct: 104 LWRFDKWDGQCPEYSGEEQAICAVGLAKSKHGVFVEAIQYLLILATPVELILVGVCCSGG 163

Query: 47  GDGSDPFAEVSLQPL 3
            DGSDPFAEVSLQPL
Sbjct: 164 ADGSDPFAEVSLQPL 178


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