BLASTX nr result

ID: Cnidium21_contig00034329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034329
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81277.1| hypothetical protein VITISV_007829 [Vitis vinifera]   240   8e-62
ref|XP_002519871.1| Ran GTPase binding protein, putative [Ricinu...   225   3e-57
ref|XP_002267479.1| PREDICTED: protein BREVIS RADIX [Vitis vinif...   218   3e-55
emb|CBI37411.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_004146121.1| PREDICTED: protein BREVIS RADIX-like [Cucumi...   189   2e-46

>emb|CAN81277.1| hypothetical protein VITISV_007829 [Vitis vinifera]
          Length = 424

 Score =  240 bits (613), Expect = 8e-62
 Identities = 111/149 (74%), Positives = 132/149 (88%)
 Frame = -1

Query: 447 RDSCYSRLGSVKESPMTPSLNKDWTPKNHHKASGSRGYFPADSPDQGGNQQYNVSSNLYA 268
           RDS YSR+GS +ESPMTPSLNK+W P+N++K SGS+GYFP++  DQ G+ QYN  S+ Y 
Sbjct: 274 RDSSYSRMGSARESPMTPSLNKEWIPRNYYKPSGSKGYFPSEPSDQYGSHQYNAGSSAYG 333

Query: 267 TGGPKGEASSVEAARTSTSSRDEASVSVSNASDVESEWVEQDETGVYITIRQLADGTREL 88
           TGGP+GE SS++A+RT+TSSRDEASVS+SNASD+E+EWVEQDE GVYITIRQLADGTREL
Sbjct: 334 TGGPRGETSSMDASRTTTSSRDEASVSISNASDMETEWVEQDEPGVYITIRQLADGTREL 393

Query: 87  RRVRFSREKFGEVDAKLWWEQNRERIQTQ 1
           RRVRFSRE+FGEV AK WWE+NRERIQ Q
Sbjct: 394 RRVRFSRERFGEVHAKTWWEENRERIQAQ 422



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/142 (28%), Positives = 59/142 (41%)
 Frame = -1

Query: 435 YSRLGSVKESPMTPSLNKDWTPKNHHKASGSRGYFPADSPDQGGNQQYNVSSNLYATGGP 256
           Y R GS   +P       D+T  +H+  +GS   F               +  L     P
Sbjct: 140 YLRPGSSSSTPAW-----DFTTSSHNPGAGSDSRF---------------TGVLRGDQTP 179

Query: 255 KGEASSVEAARTSTSSRDEASVSVSNASDVESEWVEQDETGVYITIRQLADGTRELRRVR 76
            G + S ++        DE             EW+ Q E GV+IT   L  G  +L+R+R
Sbjct: 180 GGVSISAQSCDVVLEDEDEPK-----------EWMAQVEPGVHITFVSLPHGGNDLKRIR 228

Query: 75  FSREKFGEVDAKLWWEQNRERI 10
           FSRE F +  A+ WW +N +RI
Sbjct: 229 FSREMFNKWQAQRWWGENYDRI 250


>ref|XP_002519871.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223540917|gb|EEF42475.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 331

 Score =  225 bits (573), Expect = 3e-57
 Identities = 108/149 (72%), Positives = 129/149 (86%)
 Frame = -1

Query: 447 RDSCYSRLGSVKESPMTPSLNKDWTPKNHHKASGSRGYFPADSPDQGGNQQYNVSSNLYA 268
           RDSCYSR+GS +ESPM P+    +TP+NH+K SGS+GYFP+D  +Q G+Q Y+  S+ Y 
Sbjct: 185 RDSCYSRMGSARESPMAPA----YTPRNHYKPSGSKGYFPSDVMEQVGSQHYHGGSSGYG 240

Query: 267 TGGPKGEASSVEAARTSTSSRDEASVSVSNASDVESEWVEQDETGVYITIRQLADGTREL 88
           TGGPK EA+S++A+RT+TSSRDE SVSVSNASD+ESEWVE+DE GVYITIRQL DGTREL
Sbjct: 241 TGGPKVEAASMDASRTTTSSRDEPSVSVSNASDIESEWVEEDEPGVYITIRQLVDGTREL 300

Query: 87  RRVRFSREKFGEVDAKLWWEQNRERIQTQ 1
           RRVRFSREKFGEV AK+WWE+NRERIQTQ
Sbjct: 301 RRVRFSREKFGEVHAKMWWEENRERIQTQ 329



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = -1

Query: 261 GPKGEASSVEAARTSTSSRDEASVSVSNASDVES-EWVEQDETGVYITIRQLADGTRELR 85
           G +GE+          + R   S  V    + ES EW+ Q E GV+IT   L +G  +L+
Sbjct: 75  GTRGESRFTRVLSGDETPRGTESCDVVVEDEDESKEWMAQVEPGVHITFVSLPNGGNDLK 134

Query: 84  RVRFSREKFGEVDAKLWWEQNRERI 10
           R+RFSRE F +  A+ WW +N +RI
Sbjct: 135 RIRFSREMFNKWQAQRWWGENYDRI 159


>ref|XP_002267479.1| PREDICTED: protein BREVIS RADIX [Vitis vinifera]
          Length = 360

 Score =  218 bits (556), Expect = 3e-55
 Identities = 105/149 (70%), Positives = 124/149 (83%)
 Frame = -1

Query: 447 RDSCYSRLGSVKESPMTPSLNKDWTPKNHHKASGSRGYFPADSPDQGGNQQYNVSSNLYA 268
           RDS YSR+GS +ESPMTPSLNK+W P+N++K SGS+G+            QYN  S+ Y 
Sbjct: 222 RDSSYSRMGSARESPMTPSLNKEWIPRNYYKPSGSKGH------------QYNAGSSAYG 269

Query: 267 TGGPKGEASSVEAARTSTSSRDEASVSVSNASDVESEWVEQDETGVYITIRQLADGTREL 88
           TGGP+GE SS++A+RT+TSSRDEASVS+SNASD+E+EWVEQDE GVYITIRQLADGTREL
Sbjct: 270 TGGPRGETSSMDASRTTTSSRDEASVSISNASDMETEWVEQDEPGVYITIRQLADGTREL 329

Query: 87  RRVRFSREKFGEVDAKLWWEQNRERIQTQ 1
           RRVRFSRE+FGEV AK WWE+NRERIQ Q
Sbjct: 330 RRVRFSRERFGEVHAKTWWEENRERIQAQ 358



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/142 (28%), Positives = 59/142 (41%)
 Frame = -1

Query: 435 YSRLGSVKESPMTPSLNKDWTPKNHHKASGSRGYFPADSPDQGGNQQYNVSSNLYATGGP 256
           Y R GS   +P       D+T  +H+  +GS   F               +  L     P
Sbjct: 86  YLRPGSSSSTPAW-----DFTTSSHNPGAGSDSRF---------------TGVLRGDQTP 125

Query: 255 KGEASSVEAARTSTSSRDEASVSVSNASDVESEWVEQDETGVYITIRQLADGTRELRRVR 76
            G + S ++        DE             EW+ Q E GV+IT   L  G  +L+R+R
Sbjct: 126 GGVSISAQSCDVVLEDEDEPK-----------EWMAQVEPGVHITFVSLPHGGNDLKRIR 174

Query: 75  FSREKFGEVDAKLWWEQNRERI 10
           FSRE F +  A+ WW +N +RI
Sbjct: 175 FSREMFNKWQAQRWWGENYDRI 196


>emb|CBI37411.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  193 bits (491), Expect = 1e-47
 Identities = 97/149 (65%), Positives = 113/149 (75%)
 Frame = -1

Query: 447 RDSCYSRLGSVKESPMTPSLNKDWTPKNHHKASGSRGYFPADSPDQGGNQQYNVSSNLYA 268
           RDS YSR+GS +ESPMTPSLNK+W P+N++K SGS                         
Sbjct: 220 RDSSYSRMGSARESPMTPSLNKEWIPRNYYKPSGS------------------------- 254

Query: 267 TGGPKGEASSVEAARTSTSSRDEASVSVSNASDVESEWVEQDETGVYITIRQLADGTREL 88
             GP+GE SS++A+RT+TSSRDEASVS+SNASD+E+EWVEQDE GVYITIRQLADGTREL
Sbjct: 255 --GPRGETSSMDASRTTTSSRDEASVSISNASDMETEWVEQDEPGVYITIRQLADGTREL 312

Query: 87  RRVRFSREKFGEVDAKLWWEQNRERIQTQ 1
           RRVRFSRE+FGEV AK WWE+NRERIQ Q
Sbjct: 313 RRVRFSRERFGEVHAKTWWEENRERIQAQ 341



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/142 (28%), Positives = 59/142 (41%)
 Frame = -1

Query: 435 YSRLGSVKESPMTPSLNKDWTPKNHHKASGSRGYFPADSPDQGGNQQYNVSSNLYATGGP 256
           Y R GS   +P       D+T  +H+  +GS   F               +  L     P
Sbjct: 86  YLRPGSSSSTPAW-----DFTTSSHNPGAGSDSRF---------------TGVLRGDQTP 125

Query: 255 KGEASSVEAARTSTSSRDEASVSVSNASDVESEWVEQDETGVYITIRQLADGTRELRRVR 76
            G + S ++        DE             EW+ Q E GV+IT   L  G  +L+R+R
Sbjct: 126 GGVSISAQSCDVVLEDEDEPK-----------EWMAQVEPGVHITFVSLPHGGNDLKRIR 174

Query: 75  FSREKFGEVDAKLWWEQNRERI 10
           FSRE F +  A+ WW +N +RI
Sbjct: 175 FSREMFNKWQAQRWWGENYDRI 196


>ref|XP_004146121.1| PREDICTED: protein BREVIS RADIX-like [Cucumis sativus]
           gi|449520457|ref|XP_004167250.1| PREDICTED: protein
           BREVIS RADIX-like [Cucumis sativus]
          Length = 361

 Score =  189 bits (481), Expect = 2e-46
 Identities = 97/149 (65%), Positives = 118/149 (79%)
 Frame = -1

Query: 447 RDSCYSRLGSVKESPMTPSLNKDWTPKNHHKASGSRGYFPADSPDQGGNQQYNVSSNLYA 268
           RDS YS++G  ++SPMT S NKDWTP+N+ K SGS+G FP+D     GN      S+ Y 
Sbjct: 216 RDSSYSKVG--RDSPMT-SANKDWTPRNY-KPSGSKG-FPSDQHYDHGNSHPYAGSSAYP 270

Query: 267 TGGPKGEASSVEAARTSTSSRDEASVSVSNASDVESEWVEQDETGVYITIRQLADGTREL 88
            G  KG+ SS+EA+RT+TSSRDE S+S+SNASD+E+EWVE+DE GVYITIRQL DGTREL
Sbjct: 271 AGSVKGDMSSMEASRTTTSSRDEPSISISNASDIEAEWVEEDEPGVYITIRQLVDGTREL 330

Query: 87  RRVRFSREKFGEVDAKLWWEQNRERIQTQ 1
           RRVRFSRE+FGE++AK WWE NRERIQ Q
Sbjct: 331 RRVRFSRERFGEMNAKQWWEHNRERIQAQ 359



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = -1

Query: 171 DVESEWVEQDETGVYITIRQLADGTRELRRVRFSREKFGEVDAKLWWEQNRERI 10
           D   EW+ Q E GV+IT   L +G  +L+R+RF+RE F +  A+ WW +N +RI
Sbjct: 139 DEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRI 192


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