BLASTX nr result

ID: Cnidium21_contig00034322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034322
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41626.1| unknown [Lotus japonicus]                               59   1e-06
gb|ADR71226.1| 60S ribosomal protein L5B [Hevea brasiliensis]          57   2e-06
gb|ABB16983.1| unknown [Solanum tuberosum]                             57   4e-06
ref|XP_002885727.1| hypothetical protein ARALYDRAFT_480054 [Arab...    56   5e-06
ref|XP_003548576.1| PREDICTED: 60S ribosomal protein L5-like [Gl...    56   7e-06

>gb|AFK41626.1| unknown [Lotus japonicus]
          Length = 207

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = -2

Query: 204 IEPAKSRRPFRPLLDVGILRTTTGNHDFGALK-VFFIFMFFCKTLLVDLMCLRR 46
           +EPA++RRPFR LLDVG+++TTTGN  FGALK    + ++   T++ DL+ LRR
Sbjct: 132 VEPAETRRPFRALLDVGLVKTTTGNRVFGALKGALGLGVWIFLTVIKDLLALRR 185


>gb|ADR71226.1| 60S ribosomal protein L5B [Hevea brasiliensis]
          Length = 298

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = -2

Query: 204 IEPAKSRRPFRPLLDVGILRTTTGNHDFGALK 109
           +EPA++RRPFR LLDVG++RTTTGNH FGALK
Sbjct: 132 VEPAETRRPFRALLDVGLVRTTTGNHVFGALK 163


>gb|ABB16983.1| unknown [Solanum tuberosum]
          Length = 302

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -2

Query: 204 IEPAKSRRPFRPLLDVGILRTTTGNHDFGALK 109
           +EPA+SRRPFR LLDVG+LRTTTGN  FGALK
Sbjct: 132 VEPAESRRPFRALLDVGLLRTTTGNRVFGALK 163


>ref|XP_002885727.1| hypothetical protein ARALYDRAFT_480054 [Arabidopsis lyrata subsp.
           lyrata] gi|297331567|gb|EFH61986.1| hypothetical protein
           ARALYDRAFT_480054 [Arabidopsis lyrata subsp. lyrata]
          Length = 304

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -2

Query: 204 IEPAKSRRPFRPLLDVGILRTTTGNHDFGALKV 106
           IEP +SRRPFR LLDVG++RTTTGN  FGALKV
Sbjct: 132 IEPTESRRPFRALLDVGLIRTTTGNRVFGALKV 164


>ref|XP_003548576.1| PREDICTED: 60S ribosomal protein L5-like [Glycine max]
          Length = 298

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = -2

Query: 204 IEPAKSRRPFRPLLDVGILRTTTGNHDFGALK 109
           +EPA+SRRPFR LLDVG++RTTTGN  FGALK
Sbjct: 132 VEPAESRRPFRALLDVGLIRTTTGNRVFGALK 163


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