BLASTX nr result

ID: Cnidium21_contig00034305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034305
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC11022.1| replication protein a 30 kda subunit [Camellia si...   106   2e-21
ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [V...   106   2e-21
ref|XP_002527967.1| Replication protein A 30 kDa subunit, putati...   105   5e-21
ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subu...   104   6e-21
ref|XP_003544637.1| PREDICTED: replication factor A protein 2-li...   104   8e-21

>gb|AEC11022.1| replication protein a 30 kda subunit [Camellia sinensis]
          Length = 222

 Score =  106 bits (265), Expect = 2e-21
 Identities = 63/157 (40%), Positives = 80/157 (50%)
 Frame = +1

Query: 4   DSGVSPAKSRDAPGTTPVTVKKIIEASQSGDEKSNFLXXXXXXXXXXXXXXXXXKAERVT 183
           D G SPAKSR+A G  P+TVK+I E++ SGDEKSN++                 K ERVT
Sbjct: 21  DIGSSPAKSRNAYGVVPITVKQISESAHSGDEKSNYVVDGVDVVNVTLIGMVSKKTERVT 80

Query: 184 DVSFALDDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMSE 363
           DV+F LDDGT                                              EM  
Sbjct: 81  DVAFTLDDGT------------------------------GRIDCNRWVNEAFDSKEMEN 110

Query: 364 IEEGMYVRVNGRLKSYQGKKQIAAFSVRPVTNFDEVT 474
           I++G+YVRVNG +KS QG++Q+ AFSVRPVTNFDE++
Sbjct: 111 IQDGIYVRVNGLIKSLQGRRQLIAFSVRPVTNFDEIS 147


>ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
           gi|296081770|emb|CBI20775.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  106 bits (264), Expect = 2e-21
 Identities = 66/156 (42%), Positives = 77/156 (49%)
 Frame = +1

Query: 4   DSGVSPAKSRDAPGTTPVTVKKIIEASQSGDEKSNFLXXXXXXXXXXXXXXXXXKAERVT 183
           DSGVS AKSR+  G  PVTVK+I EAS SGD+KSNF                  K+ERVT
Sbjct: 22  DSGVSSAKSRETQGLIPVTVKQISEASHSGDDKSNFQIDGVDVTNITLVGMVFDKSERVT 81

Query: 184 DVSFALDDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMSE 363
           DVSFALDDGT                                              EM  
Sbjct: 82  DVSFALDDGT------------------------------GRIECKRWVNEAFDTREMEN 111

Query: 364 IEEGMYVRVNGRLKSYQGKKQIAAFSVRPVTNFDEV 471
           I +G+YVR+NG L+S  G +Q+ AFSVRPVTNFDE+
Sbjct: 112 ISDGIYVRLNGHLRSSGGNRQLVAFSVRPVTNFDEI 147


>ref|XP_002527967.1| Replication protein A 30 kDa subunit, putative [Ricinus communis]
           gi|223532593|gb|EEF34379.1| Replication protein A 30 kDa
           subunit, putative [Ricinus communis]
          Length = 242

 Score =  105 bits (261), Expect = 5e-21
 Identities = 63/157 (40%), Positives = 79/157 (50%)
 Frame = +1

Query: 4   DSGVSPAKSRDAPGTTPVTVKKIIEASQSGDEKSNFLXXXXXXXXXXXXXXXXXKAERVT 183
           DS  SPAKSRD+ G  PVTVK+I +AS SGDE SN++                 KA++VT
Sbjct: 25  DSAPSPAKSRDSQGLVPVTVKQISQASHSGDENSNYVIDGVDVTNVTVVGMVFDKAQKVT 84

Query: 184 DVSFALDDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMSE 363
           DV+F +DDGT                                              EM  
Sbjct: 85  DVNFTVDDGT------------------------------GRIGCKRWVNENFDSSEMET 114

Query: 364 IEEGMYVRVNGRLKSYQGKKQIAAFSVRPVTNFDEVT 474
           I++GMYVRV+G L+S+QG +Q+ AFSVRPV NFDEVT
Sbjct: 115 IQDGMYVRVSGHLRSFQGVRQLGAFSVRPVMNFDEVT 151


>ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
           sativus] gi|449519474|ref|XP_004166760.1| PREDICTED:
           replication protein A 32 kDa subunit A-like [Cucumis
           sativus]
          Length = 271

 Score =  104 bits (260), Expect = 6e-21
 Identities = 63/153 (41%), Positives = 77/153 (50%)
 Frame = +1

Query: 16  SPAKSRDAPGTTPVTVKKIIEASQSGDEKSNFLXXXXXXXXXXXXXXXXXKAERVTDVSF 195
           S AKSR++PG  PVTVK+I EAS SG+EK+NF+                 KAER TD++F
Sbjct: 22  SSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF 81

Query: 196 ALDDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMSEIEEG 375
            +DDGT                                              +M EI++G
Sbjct: 82  TVDDGTGTIGCKRWVNDTFDTN------------------------------QMEEIQDG 111

Query: 376 MYVRVNGRLKSYQGKKQIAAFSVRPVTNFDEVT 474
           MYVRVNG LK +Q  KQI AFSVRPVTNFDE+T
Sbjct: 112 MYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEIT 144


>ref|XP_003544637.1| PREDICTED: replication factor A protein 2-like [Glycine max]
          Length = 292

 Score =  104 bits (259), Expect = 8e-21
 Identities = 65/156 (41%), Positives = 74/156 (47%)
 Frame = +1

Query: 4   DSGVSPAKSRDAPGTTPVTVKKIIEASQSGDEKSNFLXXXXXXXXXXXXXXXXXKAERVT 183
           DS  +P+ SR+ PG  PVTVK+I EASQSGDEKSNF+                 K ER T
Sbjct: 45  DSSPAPSNSRETPGLVPVTVKQISEASQSGDEKSNFVINGVDLNNVTLVGMMFEKVERNT 104

Query: 184 DVSFALDDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMSE 363
           DVSF LDDGT                                              EM  
Sbjct: 105 DVSFVLDDGT------------------------------GRIKCRRWINEAFDTKEMEA 134

Query: 364 IEEGMYVRVNGRLKSYQGKKQIAAFSVRPVTNFDEV 471
           +   MYVRV G LKS+QG KQ+ AFSVRPVTNFDE+
Sbjct: 135 VMNDMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEI 170


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