BLASTX nr result

ID: Cnidium21_contig00034302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034302
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]    98   2e-18
ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|2...    83   7e-14
ref|XP_002530358.1| conserved hypothetical protein [Ricinus comm...    77   4e-12
ref|NP_188460.1| uncharacterized protein [Arabidopsis thaliana] ...    61   4e-07
ref|XP_002885248.1| hypothetical protein ARALYDRAFT_479330 [Arab...    60   5e-07

>emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]
          Length = 865

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 6/206 (2%)
 Frame = +3

Query: 6    PQLPPFTFRNPSHCSNKWSHKMQHDNALLGPAAPIHFLVTYNKLYIE-----KEADGHSA 170
            PQLPPF  R PS  SNKWSHK+Q D+AL+GP  P+  L     ++       +EADG S 
Sbjct: 644  PQLPPFFLRRPSCRSNKWSHKVQRDDALVGPVLPLPILSLLRDIHDTGCFDLEEADGFSF 703

Query: 171  NRLLELECNKVSQMVNKVVRDTAYENLADDSEHAVSLANDKDDMCNSSQDGDHFSIYKPV 350
               + LECN+V ++ +++    +   L  D  HA+SLAND+++    +Q+   F +Y   
Sbjct: 704  QEEVSLECNEVMKVTSEMAVSDSSSELHGD--HAISLANDREETWIDTQNLKPFYLYDQQ 761

Query: 351  AFSNKISNVDPPASASSTSENQNYLTFLSRCSPTEVYSSDKLE-YIKPEAIDAICRTGLK 527
             FS K S +DP    S   +++ + T + +  P E+    ++E  +  E  D +    LK
Sbjct: 762  PFSAKCSRLDPRQDTSG-YKDERFDTLIFK-KPKELLVDGEVETRVGLELFDDLSSVELK 819

Query: 528  FNDRAIGHLPAEFKYLLGQQKKFKNS 605
            F+  A+     E +     +++F  S
Sbjct: 820  FDAPAMNFEAKELQAYKALKRQFLKS 845


>ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|222858389|gb|EEE95936.1|
            predicted protein [Populus trichocarpa]
          Length = 906

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 10/215 (4%)
 Frame = +3

Query: 6    PQLPPFTFRNPSHCSNKWSHKMQHDNALLGPAAPIHFLVTYNKL-----YIEKEADGHSA 170
            PQLPPF  R PS+ SN+   K+Q  +AL+GPA P+  L T ++L       ++E  G S+
Sbjct: 699  PQLPPFFLRKPSNHSNRCLRKVQSSDALVGPALPLPILSTLHELRNGCPNSQEETGGFSS 758

Query: 171  NRLLELECNKVSQMVNKVVRDTAYENLADDSEHAVSLANDKDDMCNSSQDGDHFSIYKPV 350
               L + CN+V Q+  +V    +   L DD  +A+SL +D+DD  + S+    F +Y P 
Sbjct: 759  ESELSVRCNEVMQVAKEVAVSDSTTKLQDD--NAISLDDDRDDFLDHSEKPKSFLLYHPT 816

Query: 351  A--FSNKISNVDPPASASSTSENQNYLTFLSRCSPTEVYSSDKLEYIKPEAIDAICRTGL 524
            A   S ++   D      +  E Q         SP      +K+E  K E  D +C   L
Sbjct: 817  ACQLSFQVHKED------NLHEKQ---------SP----HPEKVETFKLEFFDDLCPIDL 857

Query: 525  KFNDRAIGHLPAEFK---YLLGQQKKFKNSFTVKR 620
            KF+ R +     E K    L     K++  FT  R
Sbjct: 858  KFDAREVKFSSQESKISNLLKKNFSKWQEEFTPYR 892


>ref|XP_002530358.1| conserved hypothetical protein [Ricinus communis]
            gi|223530105|gb|EEF32019.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 912

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 46/120 (38%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
 Frame = +3

Query: 6    PQLPPFTFRNPSHCSNKWSHKMQHDNALLGPAAPIHFLVTYNKL-----YIEKEADGHSA 170
            PQLPPF FR PS  SN+WSHK+   +AL+GP  P+  L+T ++L       E E    S 
Sbjct: 695  PQLPPFFFRKPSSRSNRWSHKVPRTDALVGPVLPLPILMTLHELRNGCPNSEDEIGLFSP 754

Query: 171  NRLLELECNKVSQMVNKVVRDTAYENLADDSEHAVSLANDKDDMCNSSQDGDHFSIYKPV 350
               L   CN+V Q+  ++    +   L DD   AVSLA+D+DD+           +Y+PV
Sbjct: 755  EMELSNRCNEVMQVAREMAMPDSTVELHDDD--AVSLADDRDDIWVDLDKPRSLCLYRPV 812


>ref|NP_188460.1| uncharacterized protein [Arabidopsis thaliana]
            gi|11994094|dbj|BAB01097.1| unnamed protein product
            [Arabidopsis thaliana] gi|332642560|gb|AEE76081.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 873

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
 Frame = +3

Query: 6    PQLPPFTFRNPSHCSNKWSHKMQHDNALLGPAAPIHFLVTYNKLY---IEKEADGHSANR 176
            PQLPPF  RNPS  S+KWS K Q    ++GP  P+  L+T ++ +   +  E +  S   
Sbjct: 668  PQLPPFLLRNPSSRSSKWSKKEQPGVEVVGPVVPLPVLITLHEFHNGCLNSEQE-FSPEA 726

Query: 177  LLELECNKVSQMVNKVVRDTAYENLADDSEHAVSLANDKDD----MCNSSQDGDHFSIYK 344
                 CN++S+   ++     +E         +SL  D+ D      +S ++   F  Y+
Sbjct: 727  EFYNRCNQISKATRQIANSGRHET-------TISLDEDRADEMWLNSDSQEEKKTFIAYR 779

Query: 345  PVAFSNKISNVDPPASASSTSENQNYLTFLSRCSPTEVYSSDKLEYIKPEAIDAICRTGL 524
            P+             +A S    Q   TF+SR    +    + +     E  D +    +
Sbjct: 780  PIT-----------KTAESDRLQQEVTTFVSRIRGCKEGDDNAVGRRGLELFDELSPVEM 828

Query: 525  KFNDRAIGHLPAEFKYLLGQQKKFKNSFTVKRSSFRK 635
             F +R +     + K +L   K F + +  + SS+++
Sbjct: 829  FFENREVNFDKFDMKAML-TDKTFHSQWQDRSSSYQE 864


>ref|XP_002885248.1| hypothetical protein ARALYDRAFT_479330 [Arabidopsis lyrata subsp.
            lyrata] gi|297331088|gb|EFH61507.1| hypothetical protein
            ARALYDRAFT_479330 [Arabidopsis lyrata subsp. lyrata]
          Length = 856

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 53/154 (34%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
 Frame = +3

Query: 6    PQLPPFTFRNPSHCSNKWSHKMQHDNALLGPAAPIHFLVTYNK-----LYIEKEADGHSA 170
            PQLPPF  R PS  SNKWS K Q    L+GP  P+  L+T ++     L  E+E    S 
Sbjct: 654  PQLPPFVLRKPSSRSNKWSKKEQPGVELVGPVLPLPVLITLHEFRNGCLNSEQE---FSP 710

Query: 171  NRLLELECNKVSQMVNKVVRDTAYENLADDSEHAVSLANDKDD----MCNSSQDGDHFSI 338
               L   CN++S    KV R+ A  N   D E  +SL +D DD      +S ++   F  
Sbjct: 711  EAELSNRCNQIS----KVTRELA--NSGRD-ETTISLDDDLDDEMWLNSDSQKEKKTFIA 763

Query: 339  YKPVAFSNKISNVDPPASASSTSENQNYLTFLSR 440
            Y+P+             +A S    Q   TF+SR
Sbjct: 764  YRPIT-----------KTADSDRLQQEVTTFVSR 786


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