BLASTX nr result

ID: Cnidium21_contig00034295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034295
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis...   471   e-131
emb|CBI26799.3| unnamed protein product [Vitis vinifera]              471   e-131
ref|XP_002527536.1| tho2 protein, putative [Ricinus communis] gi...   471   e-131
ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126

>ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera]
          Length = 1849

 Score =  471 bits (1213), Expect = e-131
 Identities = 240/291 (82%), Positives = 261/291 (89%)
 Frame = -1

Query: 873 VTQMAQDLTMPGEYRSRLIKLAKWLVECSLVPLRLFQXXXXXXXXXXXEMIKIKAADLKS 694
           VTQMA DLTMPGE R+RLIKLAKWLVE +LVPLRLFQ           EMIKIKA +LK+
Sbjct: 81  VTQMALDLTMPGENRARLIKLAKWLVESTLVPLRLFQERCEEEFLWESEMIKIKAQELKN 140

Query: 693 KEVRVNTRLLYQQTKFNLLREESEGYAKLITLLCGRPEASSQNGSAATVGIIKSLIGHFD 514
           KEVRVNTRLLYQQTKFNL+REESEGY+KL+TLLC   E+SSQN SAAT+GIIKSLIGHFD
Sbjct: 141 KEVRVNTRLLYQQTKFNLVREESEGYSKLVTLLCQGSESSSQNASAATIGIIKSLIGHFD 200

Query: 513 LDPNRVFDIVLECFELQPDNMVFLDLIPIFPKSHASQILGCKFQYYQRMEVSSTVPFGLY 334
           LDPNRVFDIVLECFE QPDN VFLDLIPIFPKSHASQILG K+QYYQRMEV++ VP GLY
Sbjct: 201 LDPNRVFDIVLECFEHQPDNSVFLDLIPIFPKSHASQILGFKYQYYQRMEVNNRVPPGLY 260

Query: 333 QLTALLVKEDFIDLDSIYAHLLPRNEDAFEHYNAFIAKRLEEANKIGKINLAATGKDLMD 154
           QLTALLVKE+FIDLDSIYAHLLP++E+AFEHYN F AKRL+EANKIGKINLAATGKDLM+
Sbjct: 261 QLTALLVKEEFIDLDSIYAHLLPKDEEAFEHYNVFSAKRLDEANKIGKINLAATGKDLME 320

Query: 153 DEKQGDVNVDLFAALDMETEAVDERSSELENSQTLGLLAGFLSVDDWCHAH 1
           DEKQGDV +DLFAALDMETEAV ERSSELEN+QTLGLL GFL+VDDW HAH
Sbjct: 321 DEKQGDVTIDLFAALDMETEAVAERSSELENNQTLGLLTGFLAVDDWYHAH 371


>emb|CBI26799.3| unnamed protein product [Vitis vinifera]
          Length = 1767

 Score =  471 bits (1213), Expect = e-131
 Identities = 240/291 (82%), Positives = 261/291 (89%)
 Frame = -1

Query: 873 VTQMAQDLTMPGEYRSRLIKLAKWLVECSLVPLRLFQXXXXXXXXXXXEMIKIKAADLKS 694
           VTQMA DLTMPGE R+RLIKLAKWLVE +LVPLRLFQ           EMIKIKA +LK+
Sbjct: 81  VTQMALDLTMPGENRARLIKLAKWLVESTLVPLRLFQERCEEEFLWESEMIKIKAQELKN 140

Query: 693 KEVRVNTRLLYQQTKFNLLREESEGYAKLITLLCGRPEASSQNGSAATVGIIKSLIGHFD 514
           KEVRVNTRLLYQQTKFNL+REESEGY+KL+TLLC   E+SSQN SAAT+GIIKSLIGHFD
Sbjct: 141 KEVRVNTRLLYQQTKFNLVREESEGYSKLVTLLCQGSESSSQNASAATIGIIKSLIGHFD 200

Query: 513 LDPNRVFDIVLECFELQPDNMVFLDLIPIFPKSHASQILGCKFQYYQRMEVSSTVPFGLY 334
           LDPNRVFDIVLECFE QPDN VFLDLIPIFPKSHASQILG K+QYYQRMEV++ VP GLY
Sbjct: 201 LDPNRVFDIVLECFEHQPDNSVFLDLIPIFPKSHASQILGFKYQYYQRMEVNNRVPPGLY 260

Query: 333 QLTALLVKEDFIDLDSIYAHLLPRNEDAFEHYNAFIAKRLEEANKIGKINLAATGKDLMD 154
           QLTALLVKE+FIDLDSIYAHLLP++E+AFEHYN F AKRL+EANKIGKINLAATGKDLM+
Sbjct: 261 QLTALLVKEEFIDLDSIYAHLLPKDEEAFEHYNVFSAKRLDEANKIGKINLAATGKDLME 320

Query: 153 DEKQGDVNVDLFAALDMETEAVDERSSELENSQTLGLLAGFLSVDDWCHAH 1
           DEKQGDV +DLFAALDMETEAV ERSSELEN+QTLGLL GFL+VDDW HAH
Sbjct: 321 DEKQGDVTIDLFAALDMETEAVAERSSELENNQTLGLLTGFLAVDDWYHAH 371


>ref|XP_002527536.1| tho2 protein, putative [Ricinus communis]
           gi|223533086|gb|EEF34845.1| tho2 protein, putative
           [Ricinus communis]
          Length = 1828

 Score =  471 bits (1213), Expect = e-131
 Identities = 240/291 (82%), Positives = 259/291 (89%)
 Frame = -1

Query: 873 VTQMAQDLTMPGEYRSRLIKLAKWLVECSLVPLRLFQXXXXXXXXXXXEMIKIKAADLKS 694
           VTQMAQDLTMPGEYR+RLIKLAKWLVE SLVPLR FQ           EMIKIKA DLK 
Sbjct: 81  VTQMAQDLTMPGEYRARLIKLAKWLVESSLVPLRFFQERCEEEFLWEAEMIKIKAQDLKG 140

Query: 693 KEVRVNTRLLYQQTKFNLLREESEGYAKLITLLCGRPEASSQNGSAATVGIIKSLIGHFD 514
           KEVRVNTRLLYQQTKFNL+REESEGYAKL+TLLC   +  + N SAAT+GIIKSLIGHFD
Sbjct: 141 KEVRVNTRLLYQQTKFNLVREESEGYAKLVTLLCQGYDNVNSNASAATIGIIKSLIGHFD 200

Query: 513 LDPNRVFDIVLECFELQPDNMVFLDLIPIFPKSHASQILGCKFQYYQRMEVSSTVPFGLY 334
           LDPNRVFDIVLECFELQPDN +FLDLIPIFPKSHASQILG KFQYYQR+EV+S VPFGLY
Sbjct: 201 LDPNRVFDIVLECFELQPDNNIFLDLIPIFPKSHASQILGFKFQYYQRLEVNSPVPFGLY 260

Query: 333 QLTALLVKEDFIDLDSIYAHLLPRNEDAFEHYNAFIAKRLEEANKIGKINLAATGKDLMD 154
           +LTALLVKE+FIDLDSIY+HLLPR+++AFEHY AF +KRL+EANKIGKINLAATGKDLM+
Sbjct: 261 KLTALLVKEEFIDLDSIYSHLLPRDDEAFEHYVAFSSKRLDEANKIGKINLAATGKDLME 320

Query: 153 DEKQGDVNVDLFAALDMETEAVDERSSELENSQTLGLLAGFLSVDDWCHAH 1
           DEKQGDV VDLFAALDMET+AV ER SELENSQTLGLL GFLSVDDW HAH
Sbjct: 321 DEKQGDVTVDLFAALDMETDAVAERLSELENSQTLGLLTGFLSVDDWFHAH 371


>ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|222839197|gb|EEE77548.1|
           predicted protein [Populus trichocarpa]
          Length = 1805

 Score =  457 bits (1176), Expect = e-126
 Identities = 233/291 (80%), Positives = 256/291 (87%)
 Frame = -1

Query: 873 VTQMAQDLTMPGEYRSRLIKLAKWLVECSLVPLRLFQXXXXXXXXXXXEMIKIKAADLKS 694
           +TQMAQDLTM GEYRSRLIKLAKWLVE +LVPLR FQ           EMIKIKA DLK 
Sbjct: 83  ITQMAQDLTMSGEYRSRLIKLAKWLVESALVPLRFFQERCEEEFLWEAEMIKIKAQDLKG 142

Query: 693 KEVRVNTRLLYQQTKFNLLREESEGYAKLITLLCGRPEASSQNGSAATVGIIKSLIGHFD 514
           KEVRVNTRLLYQQTKFNLLREESEGYAKL+TLLC   E +++N SAAT+GIIKSLIGHFD
Sbjct: 143 KEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRGSEDTAENTSAATIGIIKSLIGHFD 202

Query: 513 LDPNRVFDIVLECFELQPDNMVFLDLIPIFPKSHASQILGCKFQYYQRMEVSSTVPFGLY 334
           LDPNRVFDIVLECFELQPD+ VFL+LIPIFPKSHASQILG KFQYYQRME++S VPFGL+
Sbjct: 203 LDPNRVFDIVLECFELQPDSNVFLELIPIFPKSHASQILGFKFQYYQRMELNSPVPFGLF 262

Query: 333 QLTALLVKEDFIDLDSIYAHLLPRNEDAFEHYNAFIAKRLEEANKIGKINLAATGKDLMD 154
           +LTALLVKE+FIDLDSI AHLLP++++AFEHYN F +KRL+ A KIGKINLAATGKDLMD
Sbjct: 263 KLTALLVKEEFIDLDSICAHLLPKDDEAFEHYNTFSSKRLDAAYKIGKINLAATGKDLMD 322

Query: 153 DEKQGDVNVDLFAALDMETEAVDERSSELENSQTLGLLAGFLSVDDWCHAH 1
           DEKQGDV VDLFAALDMETEAV E+ S+LE +QTLGLL GFLSVDDW HAH
Sbjct: 323 DEKQGDVTVDLFAALDMETEAVAEQFSDLEKNQTLGLLTGFLSVDDWYHAH 373


>ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1|
           predicted protein [Populus trichocarpa]
          Length = 1836

 Score =  457 bits (1175), Expect = e-126
 Identities = 235/291 (80%), Positives = 256/291 (87%)
 Frame = -1

Query: 873 VTQMAQDLTMPGEYRSRLIKLAKWLVECSLVPLRLFQXXXXXXXXXXXEMIKIKAADLKS 694
           +TQMAQDLTM GEYRSRLIKLAKWLVE +LVPLR FQ           EMIKIKA DLK 
Sbjct: 83  ITQMAQDLTMSGEYRSRLIKLAKWLVESALVPLRFFQERCEEEFLWEAEMIKIKAQDLKG 142

Query: 693 KEVRVNTRLLYQQTKFNLLREESEGYAKLITLLCGRPEASSQNGSAATVGIIKSLIGHFD 514
           KEVRVNTRLLYQQTKFNLLREESEGYAKL+TLL    E +++N SAAT+GIIKSLIGHFD
Sbjct: 143 KEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLYQGSEDTTENTSAATIGIIKSLIGHFD 202

Query: 513 LDPNRVFDIVLECFELQPDNMVFLDLIPIFPKSHASQILGCKFQYYQRMEVSSTVPFGLY 334
           LDPNRVFDIVLE FELQPD+ VFL+LIPIFPKSHASQILG KFQYYQR+E++S VPFGLY
Sbjct: 203 LDPNRVFDIVLEYFELQPDSNVFLELIPIFPKSHASQILGFKFQYYQRIELNSHVPFGLY 262

Query: 333 QLTALLVKEDFIDLDSIYAHLLPRNEDAFEHYNAFIAKRLEEANKIGKINLAATGKDLMD 154
           +LTALLVKE+FIDLDSI AHLLP++++AFEHYN F +KRL+EANKIGKINLAATGKDLMD
Sbjct: 263 KLTALLVKEEFIDLDSICAHLLPKDDEAFEHYNTFSSKRLDEANKIGKINLAATGKDLMD 322

Query: 153 DEKQGDVNVDLFAALDMETEAVDERSSELENSQTLGLLAGFLSVDDWCHAH 1
           DEKQGDV VDLFAALDME EAV ER SELEN+QTLGLL GFLSVDDW HAH
Sbjct: 323 DEKQGDVTVDLFAALDMEAEAVAERFSELENNQTLGLLTGFLSVDDWYHAH 373


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