BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034275
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        202   6e-50
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   197   2e-48
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   187   1e-45
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     187   2e-45
gb|ABF98227.1| retrotransposon protein, putative, unclassified [...   180   2e-43

>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  202 bits (513), Expect = 6e-50
 Identities = 99/208 (47%), Positives = 139/208 (66%)
 Frame = -3

Query: 649  AIKMSPDEALYGTKPRQLCSPATHRSSNDAVQEFQIQREALNQLLCDAIISAQQKYKQYA 470
            +I+M+P +ALYG  P Q+   +   + ++  +    Q++A+ Q L  ++  AQ++ K YA
Sbjct: 1379 SIQMTPFQALYGYPPPQINEFSVPCNVSEEARVTIEQKDAIIQKLKYSLTEAQRRIKHYA 1438

Query: 469  DRKRQEMQLQVGDMVFLRLQPYRQLSVAVRKYLKLSHKYFGPFKVLERVGKVAYKLELPA 290
            DR R E  L VGDMV+L+LQPYRQ +  +R  LKL  K++GPFK++E+VG+VAYKL+LP 
Sbjct: 1439 DRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPE 1498

Query: 289  SSAVHPVFHVSLLKKKVGSRYSVATELPKLGTEGQFLVYPVKVIDRKIIKKGNAAVVQWL 110
             S +HPVFHVS LKK +GSR      LP +G +GQ    PV V+ R++I +G  AV QWL
Sbjct: 1499 GSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWL 1558

Query: 109  VQWSNTVPEDASWELASVIQEQYPDFNP 26
            V W N  P +A+WE AS+IQ  +P FNP
Sbjct: 1559 VLWHNLSPSEATWEDASMIQSMFPSFNP 1586


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  197 bits (500), Expect = 2e-48
 Identities = 98/208 (47%), Positives = 138/208 (66%)
 Frame = -3

Query: 649  AIKMSPDEALYGTKPRQLCSPATHRSSNDAVQEFQIQREALNQLLCDAIISAQQKYKQYA 470
            AI+M+P +ALYG  P Q+   +     +   +    ++E + Q L  ++  AQ++ K YA
Sbjct: 748  AIQMTPFKALYGYSPPQISEFSVPCDVSQEARVTLEEKETIVQKLKASMEDAQRRMKYYA 807

Query: 469  DRKRQEMQLQVGDMVFLRLQPYRQLSVAVRKYLKLSHKYFGPFKVLERVGKVAYKLELPA 290
            DR R E +L+VGDMV+L+LQPYRQ +  +R  LKL  KY+GPFKVLE+VG VAY+L+LP 
Sbjct: 808  DRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPE 867

Query: 289  SSAVHPVFHVSLLKKKVGSRYSVATELPKLGTEGQFLVYPVKVIDRKIIKKGNAAVVQWL 110
             +A+HPVFHVS LKK +G+       LP +G +GQ    PV V+ R++I + N AV QWL
Sbjct: 868  EAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWL 927

Query: 109  VQWSNTVPEDASWELASVIQEQYPDFNP 26
            + WSN  P +A+WE AS IQ+ +P+F P
Sbjct: 928  ILWSNLTPAEATWEDASYIQKVFPNFQP 955


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  187 bits (476), Expect = 1e-45
 Identities = 92/208 (44%), Positives = 135/208 (64%)
 Frame = -3

Query: 649  AIKMSPDEALYGTKPRQLCSPATHRSSNDAVQEFQIQREALNQLLCDAIISAQQKYKQYA 470
            +I+M+P +ALYG  P Q+   A   + ++  +     +  + Q L  +I  AQ++ K YA
Sbjct: 1404 SIQMTPFQALYGYPPPQITEFAIPCNMSEEARVTLEDKALILQKLKSSIGEAQRRIKFYA 1463

Query: 469  DRKRQEMQLQVGDMVFLRLQPYRQLSVAVRKYLKLSHKYFGPFKVLERVGKVAYKLELPA 290
            D+ R E  L++GDMV+L+LQPYRQ+++ +R  LKL  KY+GPFKV+E++G VAYKL+LP 
Sbjct: 1464 DKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPD 1523

Query: 289  SSAVHPVFHVSLLKKKVGSRYSVATELPKLGTEGQFLVYPVKVIDRKIIKKGNAAVVQWL 110
             + +HPVFHVS LKK +G+R      LP +G +GQ    P  V+ R++I + N  V QWL
Sbjct: 1524 GAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWL 1583

Query: 109  VQWSNTVPEDASWELASVIQEQYPDFNP 26
            + W N  P +A+WE AS IQ  +P+F P
Sbjct: 1584 ILWENLTPAEATWEDASYIQAAFPNFQP 1611


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  187 bits (474), Expect = 2e-45
 Identities = 88/208 (42%), Positives = 137/208 (65%)
 Frame = -3

Query: 649  AIKMSPDEALYGTKPRQLCSPATHRSSNDAVQEFQIQREALNQLLCDAIISAQQKYKQYA 470
            AI+M+P +A+YG  P Q+   +   + ++  +    ++EA+   L +++  AQ + K +A
Sbjct: 1268 AIQMTPFKAMYGYSPPQINEFSVPCNISEEARVTIEEKEAILNKLKNSLADAQHRMKYFA 1327

Query: 469  DRKRQEMQLQVGDMVFLRLQPYRQLSVAVRKYLKLSHKYFGPFKVLERVGKVAYKLELPA 290
            D+ R E  L+VGDMV+L+L+PYRQ +  +R  LKL  K++GPFKVL+++G++AYKL+LP 
Sbjct: 1328 DKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKLQLPD 1387

Query: 289  SSAVHPVFHVSLLKKKVGSRYSVATELPKLGTEGQFLVYPVKVIDRKIIKKGNAAVVQWL 110
             + +HPVFHVS LKK +G      + LP +G +GQ    P+ V+ R+++ +   AV QWL
Sbjct: 1388 DAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWL 1447

Query: 109  VQWSNTVPEDASWELASVIQEQYPDFNP 26
            + W N  P +A+WE ASVIQ  +P FNP
Sbjct: 1448 ILWQNLSPAEATWEDASVIQAMFPSFNP 1475


>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1160

 Score =  180 bits (456), Expect = 2e-43
 Identities = 88/208 (42%), Positives = 131/208 (62%)
 Frame = -3

Query: 649  AIKMSPDEALYGTKPRQLCSPATHRSSNDAVQEFQIQREALNQLLCDAIISAQQKYKQYA 470
            +++++  EA+YG  P  +   A   + ++  +    QRE +   L + +  AQ + K+  
Sbjct: 953  SLQVTSYEAMYGVTPPHIGERAIPGNVSEEARATVQQREDMLARLKENLAKAQTRIKKLV 1012

Query: 469  DRKRQEMQLQVGDMVFLRLQPYRQLSVAVRKYLKLSHKYFGPFKVLERVGKVAYKLELPA 290
            DR R E Q ++GDMV+L++QPYRQ +  +R  LKL  K++GPF+VLE++GKVAYKL+LP 
Sbjct: 1013 DRLRSERQFELGDMVYLKMQPYRQNAFGLRGSLKLRAKFYGPFRVLEKIGKVAYKLQLPE 1072

Query: 289  SSAVHPVFHVSLLKKKVGSRYSVATELPKLGTEGQFLVYPVKVIDRKIIKKGNAAVVQWL 110
             + +HPVFHVS LKK VG +      LP +G +G     P+ V+ R++I + N  VVQWL
Sbjct: 1073 EANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVLARRVIPRQNEPVVQWL 1132

Query: 109  VQWSNTVPEDASWELASVIQEQYPDFNP 26
            + W N  PEDA+WE A+ IQ  +P F P
Sbjct: 1133 IHWENLTPEDATWENATFIQATFPHFRP 1160