BLASTX nr result

ID: Cnidium21_contig00034273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034273
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40164.3| unnamed protein product [Vitis vinifera]               64   1e-08
gb|AAR15913.1| S3 self-incompatibility locus-linked putative F-b...    60   2e-07
gb|AEX38309.1| S haplotype-specific F-box protein [Prunus armeni...    59   4e-07
gb|ADW40677.1| S-locus F-box protein 45 [Prunus armeniaca]             59   4e-07
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...    59   5e-07

>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 8/123 (6%)
 Frame = -3

Query: 350 KYEIPFTTKTGTLKLVGSVNGIVCVTD--LRSSYVP---YLWNPCLRKYKIVQS---TCF 195
           + E+P  +KT   ++VGS NG++C+T+   + SY+    +LWNP +R+++ +       F
Sbjct: 98  RLEVPVPSKTDYYQIVGSSNGLICLTESNFKGSYLSLNLFLWNPAIREFQTLPKYHINNF 157

Query: 194 SEILLRGWGKGACALGLGFHQPSCDYRVVRIVSCLDDKGDLVEKVLPKAEVFSLRMNKWR 15
           +  L+         LG  FH    DY+VVRIV  + +K         +A+V+SLR   WR
Sbjct: 158 TSPLM------VVGLGFAFHPVINDYKVVRIVYFMRNK-------TSEADVYSLRTGSWR 204

Query: 14  EIE 6
           +++
Sbjct: 205 KVD 207


>gb|AAR15913.1| S3 self-incompatibility locus-linked putative F-box protein S3-A113
           [Petunia integrifolia subsp. inflata]
          Length = 376

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
 Frame = -3

Query: 401 HRNYCTLVSTETGYVFDKY----EIPFTTKTGTL---KLVGSVNGIVCVTDLRSSYVPYL 243
           +++  + +S++ GY F       EIP  T T      +L+G  NG++ +TD   S    +
Sbjct: 70  YKSILSFLSSKEGYDFKSISPDVEIPHLTTTSACVFHQLIGPCNGLIALTD---SLTTIV 126

Query: 242 WNPCLRKYKIVQSTCFSEILLRGWGKGACALGLGFHQPSCDYRVVRIVSCLDDKGDLVEK 63
           +NP  RKY+++    F   + RG+ +    +G GF   + DY+VVR+     +  D   K
Sbjct: 127 FNPATRKYRLIPPCPFG--IPRGFRRSISGIGFGFDSDANDYKVVRLSEVYKEPCDKEMK 184

Query: 62  VLPKAEVFSLRMNKWREI 9
           V    +++   ++ WRE+
Sbjct: 185 V----DIYDFSVDSWREL 198


>gb|AEX38309.1| S haplotype-specific F-box protein [Prunus armeniaca]
          Length = 144

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
 Frame = -3

Query: 308 LVGSVNGIVCVTD--LRSSYVPYLWNPCLRKYKIVQSTCFSEILLRGWGKGACALGLGFH 135
           + GS NG++C++D  L+     ++WNP + KY+ V  +   +        G  AL  GFH
Sbjct: 54  IYGSSNGVLCISDEILKPKSRIHIWNPTIGKYRTVPLSITDDTKF-----GYIALQFGFH 108

Query: 134 QPSCDYRVVRIVSCLDDKGDLVEKVLPKAEVFSLRMNKWREIE 6
               DY+VVR++ C+D+K   V       EVFSL  N W+ IE
Sbjct: 109 PGVNDYKVVRMM-CMDNKAFAV-------EVFSLATNSWKMIE 143


>gb|ADW40677.1| S-locus F-box protein 45 [Prunus armeniaca]
          Length = 144

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
 Frame = -3

Query: 308 LVGSVNGIVCVTD--LRSSYVPYLWNPCLRKYKIVQSTCFSEILLRGWGKGACALGLGFH 135
           + GS NG++C++D  L+     ++WNP + KY+ V  +   +        G  AL  GFH
Sbjct: 54  IYGSSNGVLCISDEILKPKSRIHIWNPTIGKYRTVPLSITDDTKF-----GYIALQFGFH 108

Query: 134 QPSCDYRVVRIVSCLDDKGDLVEKVLPKAEVFSLRMNKWREIE 6
               DY+VVR++ C+D+K   V       EVFSL  N W+ IE
Sbjct: 109 PVVNDYKVVRMM-CMDNKAFAV-------EVFSLATNSWKMIE 143


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 41/130 (31%), Positives = 61/130 (46%)
 Frame = -3

Query: 392 YCTLVSTETGYVFDKYEIPFTTKTGTLKLVGSVNGIVCVTDLRSSYVPYLWNPCLRKYKI 213
           Y     T+T  ++ + + PF    G LK+VG  NG+VC   L       LWNP +++   
Sbjct: 73  YSLHFDTDTLDLYQELKFPFPNSNGDLKIVGVSNGLVCFLGLDL----LLWNPSIQRVVD 128

Query: 212 VQSTCFSEILLRGWGKGACALGLGFHQPSCDYRVVRIVSCLDDKGDLVEKVLPKAEVFSL 33
           V  T  S+ +         ALG GF   + D++VVR++    DK     K  PK E++ +
Sbjct: 129 VPRT--SDTVTTYGVPDFYALGFGFDSCADDHKVVRLL-YFADKVPFSYKRSPKVELYEV 185

Query: 32  RMNKWREIEN 3
               WR I N
Sbjct: 186 GTGSWRAINN 195


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