BLASTX nr result

ID: Cnidium21_contig00034272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034272
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522091.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
emb|CAN75064.1| hypothetical protein VITISV_025472 [Vitis vinifera]    57   2e-06

>ref|XP_002522091.1| conserved hypothetical protein [Ricinus communis]
            gi|223538690|gb|EEF40291.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 868

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
 Frame = +2

Query: 119  TFTYLKQRKNTTAVNVVTYPEMSGESCPSAMSTFQNTSS--YSKGSLKKM-NKAQSQERK 289
            T  +  Q ++ ++ N  T  E +GESCPS MS+FQ +SS  YSK   K+M ++AQSQERK
Sbjct: 750  TTGHTSQERSPSSRNWQTEVETTGESCPSEMSSFQYSSSSYYSKQGQKRMTSEAQSQERK 809

Query: 290  SKANTKQXXXXXXXXXXXXXXXXXXFTTYEKIPLKHAYGE 409
             K +T++                  FTTYEKI  KH  GE
Sbjct: 810  PKRSTRR-ESMASSDCSMGSSSYGSFTTYEKITNKHGNGE 848


>emb|CAN75064.1| hypothetical protein VITISV_025472 [Vitis vinifera]
          Length = 1013

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 53/165 (32%)
 Frame = +2

Query: 74   IWGISFLVLAVMVASTFTYLKQRKNTT--------------------------------A 157
            + GIS L+L + VA+ F +LKQ+K  T                                +
Sbjct: 821  VLGISLLILILTVAAAFIFLKQQKPPTPSPAAIPMDQLLAKKLAPIPTASVENTHQGLSS 880

Query: 158  VNVVTYPEMSGESCPSAMSTFQNTSSY----SKGS-----------------LKKMNKAQ 274
             N  T  +M GESCPS MS+FQ ++SY    SKG+                  K  ++AQ
Sbjct: 881  RNWPTEVDMVGESCPSEMSSFQRSTSYGKRGSKGASFTSEYSMGSPSYNQKGSKGASEAQ 940

Query: 275  SQERKSKANTKQXXXXXXXXXXXXXXXXXXFTTYEKIPLKHAYGE 409
            SQER  + + K+                  FT+YEKI +KH  G+
Sbjct: 941  SQERGLRKSNKRESLASSSEYSTGSPSYGSFTSYEKIHIKHGCGD 985


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