BLASTX nr result

ID: Cnidium21_contig00034241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034241
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310220.1| predicted protein [Populus trichocarpa] gi|2...    68   3e-09
ref|XP_002521580.1| conserved hypothetical protein [Ricinus comm...    59   1e-06
ref|XP_002327814.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06

>ref|XP_002310220.1| predicted protein [Populus trichocarpa] gi|222853123|gb|EEE90670.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
 Frame = +3

Query: 3   VICAFDMYNGFPILCFDIYNSETRSWICCSDLVCPEFSVPNLKDNGLYKNGVAYWATTSG 182
           ++CA  + +   +L F+IY+S T SW  C+ + C E     L  +G Y  G  +W T SG
Sbjct: 207 LVCAVTLPDRAALL-FEIYSSRTNSWRVCTAM-CLELDALPLNGDGFYIRGFVFWETQSG 264

Query: 183 DLLALDIKNDIYQVQPICSGTLKGEGILTLVDGELSYIQSYVEPSYLDKGTACDDTKDVK 362
            +L  D K + Y +  +   +    G LT + GEL Y+  + E          DD     
Sbjct: 265 AVLGFDCKEEEYGILSLPPSS-NPTGALTELRGELCYLLPHKE----------DDAWS-- 311

Query: 363 NTCIIEMFGDVTMCLKRRVTV--ELNMKIYDTRSFRVLFAPQRDFCIFKIDKVLYSCNVE 536
               IE++G++ M L+R + +  E+   + D +  R L     D  I  +   + + +V 
Sbjct: 312 ----IEVYGNMDMSLRRVIPLHSEVLGHLVDGQC-RALAFVNDDTMIIALGMKVIAYHVR 366

Query: 537 KEKFEVIRSRGITSRTTYIPYVNSL 611
             K E +          Y+PYVNSL
Sbjct: 367 AHKMERVSDARTDGFVKYLPYVNSL 391


>ref|XP_002521580.1| conserved hypothetical protein [Ricinus communis]
           gi|223539258|gb|EEF40851.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
 Frame = +3

Query: 3   VICAFDMYNGFPILCFDIYNSETRSWICCSDLVCPEFSVPNLKDNGLYKNGVAYWATTSG 182
           +ICA + ++  P L F+IY+S T SW   S+ VC E     L  +G Y  G+AYW T SG
Sbjct: 232 LICAVN-WSDLPALHFEIYSSRTGSWKI-SETVCCEVDALALNGDGFYMRGIAYWETQSG 289

Query: 183 DLLALDIKND---IYQVQPICSGTLKGEGILTLVDGELSYIQSYVEPSYLDKGT 335
            +LA +I  +   I+ + P    T    G LT + G L Y+    E      GT
Sbjct: 290 SVLAFNINYEYFGIFSLPPRSGPT----GALTEMHGGLCYLLPQEESKLKCMGT 339


>ref|XP_002327814.1| predicted protein [Populus trichocarpa] gi|222836899|gb|EEE75292.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 2/191 (1%)
 Frame = +3

Query: 42  LCFDIYNSETRSWICCSDLVCPEFSVPNLKDNGLYKNGVAYWATTSGDLLALDIKNDIYQ 221
           L F+IY+S T SW  C+ +     ++P L  +G Y  G  YW T SG +L  D+K + Y 
Sbjct: 162 LQFEIYSSRTNSWRVCNAVFLELDALP-LNGDGFYTRGFVYWETKSGAVLVFDLKEEEYG 220

Query: 222 VQPICSGTLKGEGILTLVDGELSYIQSYVEPSYLDKGTACDDTKDVKNTCIIEMFGDVTM 401
           +  +   + K  G LT + GEL Y+  + E          DD         IE++G++ M
Sbjct: 221 IVSL-PPSRKPTGALTDMRGELCYLLPHKE----------DDAWS------IEVYGNMDM 263

Query: 402 CLKRRVTV--ELNMKIYDTRSFRVLFAPQRDFCIFKIDKVLYSCNVEKEKFEVIRSRGIT 575
            L+  + +  E    + D    R L     D  I  +   + + +    + E +      
Sbjct: 264 SLQCIIPLHSEFLGHLVDGEC-RALAFVNDDTLIITLGTKVIAYHARAHRMEWVSDARTD 322

Query: 576 SRTTYIPYVNS 608
               Y PYVNS
Sbjct: 323 GFVKYFPYVNS 333


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