BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034236
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    62   5e-11
dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana] g...    59   3e-10
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    67   1e-09
gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsi...    54   4e-09
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]    65   6e-09

>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 61.6 bits (148), Expect(2) = 5e-11
 Identities = 31/110 (28%), Positives = 62/110 (56%)
 Frame = -3

Query: 331 YKHIKELFGLTQNKMSVNDYFTRLSSLWEEIESMNXXXXXXXXXXXXXXXXXXIETQREE 152
           Y+  ++++ L Q  MS++DY+T L +LW++++  +                    +  E 
Sbjct: 172 YQLTQQIWSLQQGTMSLSDYYTALKTLWDDLDGASCVSTCKNCTCCIATA-----SMIEH 226

Query: 151 SKLFVFLNGLDEVYSPMRSQLLMQIPLPTVEIACAVIQQEESQRDVLQIP 2
           SK+  FL+GL+E YS +RSQ++M+  +P +     ++ Q+ SQR+++ +P
Sbjct: 227 SKIVKFLSGLNESYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQRNIVTMP 276



 Score = 30.4 bits (67), Expect(2) = 5e-11
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -1

Query: 414 QSILFISSASEIWKQLERRFQLSNGSRN 331
           +SIL  + A+EIWK L+ RF ++N  R+
Sbjct: 144 KSILRFNDAAEIWKDLDTRFHITNLPRS 171


>dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana]
           gi|26450382|dbj|BAC42306.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|28973203|gb|AAO63926.1| unknown protein [Arabidopsis
           thaliana]
          Length = 357

 Score = 58.9 bits (141), Expect(2) = 3e-10
 Identities = 30/110 (27%), Positives = 60/110 (54%)
 Frame = -3

Query: 331 YKHIKELFGLTQNKMSVNDYFTRLSSLWEEIESMNXXXXXXXXXXXXXXXXXXIETQREE 152
           Y+  ++++ L Q  MS++DY+T L +LW++++  +                    +  E 
Sbjct: 175 YQLTQQIWSLQQGNMSLSDYYTTLKTLWDDLDGASCVNTCRNCKCCSATA-----SVNEH 229

Query: 151 SKLFVFLNGLDEVYSPMRSQLLMQIPLPTVEIACAVIQQEESQRDVLQIP 2
           SK+  FL GL++ YS +RSQ++M+  +P +     ++ Q+ SQR+++  P
Sbjct: 230 SKIVKFLAGLNDFYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQRNIVTNP 279



 Score = 30.4 bits (67), Expect(2) = 3e-10
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -1

Query: 414 QSILFISSASEIWKQLERRFQLSNGSRN 331
           +SIL  + A+EIWK L+ RF ++N  R+
Sbjct: 147 KSILRFNDAAEIWKDLDTRFHITNLPRS 174


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 39/106 (36%), Positives = 55/106 (51%)
 Frame = -3

Query: 319 KELFGLTQNKMSVNDYFTRLSSLWEEIESMNXXXXXXXXXXXXXXXXXXIETQREESKLF 140
           K +  ++Q  M+V  YFT++ +LW+E+E+                       QREE +L 
Sbjct: 417 KSIATMSQGTMTVAAYFTKIKALWDELETYRSPLTCNQRQAHLE--------QREEDRLM 468

Query: 139 VFLNGLDEVYSPMRSQLLMQIPLPTVEIACAVIQQEESQRDVLQIP 2
            FL GL+E Y  +RS +LM  PLP V  A ++I QEE QR V   P
Sbjct: 469 QFLMGLNESYKAVRSNILMMSPLPNVRQAYSLIVQEEMQRQVSSEP 514


>gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1015

 Score = 53.9 bits (128), Expect(2) = 4e-09
 Identities = 29/109 (26%), Positives = 57/109 (52%)
 Frame = -3

Query: 331 YKHIKELFGLTQNKMSVNDYFTRLSSLWEEIESMNXXXXXXXXXXXXXXXXXXIETQREE 152
           Y+  ++++ L Q  M +  Y+T L +LW E++  N                   ET+ E 
Sbjct: 117 YQLSQQIWSLQQGSMDLATYYTTLKTLWNELDGANCVTVCKNCDCCKAM-----ETKSEH 171

Query: 151 SKLFVFLNGLDEVYSPMRSQLLMQIPLPTVEIACAVIQQEESQRDVLQI 5
           +++  FL GL+E Y+ +RSQ++M+  +P +     ++ Q+ SQR++  +
Sbjct: 172 ARVIKFLAGLNESYAVIRSQIIMKKHIPELAGIYNLLDQDLSQRNITPV 220



 Score = 31.6 bits (70), Expect(2) = 4e-09
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -1

Query: 414 QSILFISSASEIWKQLERRFQLSNGSRN 331
           +SIL  S ASEIWK L  RF ++N  R+
Sbjct: 89  KSILRFSDASEIWKDLATRFHITNLPRS 116


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/100 (36%), Positives = 55/100 (55%)
 Frame = -3

Query: 319 KELFGLTQNKMSVNDYFTRLSSLWEEIESMNXXXXXXXXXXXXXXXXXXIETQREESKLF 140
           +++  L Q ++SV+ Y+T+L  LW+E+ S N                     Q+++ KL 
Sbjct: 133 RDIACLRQEQLSVSAYYTKLKGLWDELASYNAAAHG---------------AQQDQQKLM 177

Query: 139 VFLNGLDEVYSPMRSQLLMQIPLPTVEIACAVIQQEESQR 20
            FL GL+E YS +R Q+L+  PLP+V  A + I QEE QR
Sbjct: 178 QFLMGLNESYSVIRGQILLMNPLPSVRQAYSTISQEEKQR 217