BLASTX nr result

ID: Cnidium21_contig00034227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034227
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510592.1| ring finger protein, putative [Ricinus commu...   199   3e-49
emb|CBI18928.3| unnamed protein product [Vitis vinifera]              195   5e-48
ref|XP_002285896.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...   194   1e-47
ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|2...   180   2e-43

>ref|XP_002510592.1| ring finger protein, putative [Ricinus communis]
           gi|223551293|gb|EEF52779.1| ring finger protein,
           putative [Ricinus communis]
          Length = 175

 Score =  199 bits (506), Expect = 3e-49
 Identities = 88/133 (66%), Positives = 111/133 (83%)
 Frame = +2

Query: 44  KKMLLSVFLALFLPCTGMSAVFLVYICLLWYSASNGANQEFRLAEKPTSEKGLSAAELEK 223
           + MLLSVFLALFLPC GMSA+FL+YICLLWY+A++  + E     KP++EKGLSA++LEK
Sbjct: 43  QNMLLSVFLALFLPCVGMSAIFLIYICLLWYAANHHHHSEIVTPVKPSAEKGLSASDLEK 102

Query: 224 LPKMTGKDLVMGSECAVCLDNIADDHQARLVPGCNHGFHIQCADTWLSKNSVCPVCRGKL 403
           LPKMTGK+L++G+ECAVCLD I  +  ARLVPGCNHGFH++CADTWLS +SVCPVCR KL
Sbjct: 103 LPKMTGKELILGTECAVCLDEIESEQPARLVPGCNHGFHLECADTWLSNHSVCPVCRAKL 162

Query: 404 HPELFDSSEASPC 442
             + F++S  +PC
Sbjct: 163 DSQFFNASTDNPC 175


>emb|CBI18928.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  195 bits (496), Expect = 5e-48
 Identities = 93/133 (69%), Positives = 108/133 (81%)
 Frame = +2

Query: 44  KKMLLSVFLALFLPCTGMSAVFLVYICLLWYSASNGANQEFRLAEKPTSEKGLSAAELEK 223
           K MLLS+FLALFLPC GMS VF+VYICLLWYSA  G   E     KP SEKGLSA++L+K
Sbjct: 32  KTMLLSIFLALFLPCAGMSVVFVVYICLLWYSAL-GQQPELPAPVKPESEKGLSASDLDK 90

Query: 224 LPKMTGKDLVMGSECAVCLDNIADDHQARLVPGCNHGFHIQCADTWLSKNSVCPVCRGKL 403
           LPK+ GKDLV+G+ECAVCLD I  D  ARL+PGCNHGFH+QCADTWLSK+SVCP+CR  L
Sbjct: 91  LPKLAGKDLVVGAECAVCLDEIESDAPARLIPGCNHGFHLQCADTWLSKHSVCPLCRAIL 150

Query: 404 HPELFDSSEASPC 442
            PE F++SE +PC
Sbjct: 151 APEFFNTSE-NPC 162


>ref|XP_002285896.1| PREDICTED: E3 ubiquitin-protein ligase ATL23 [Vitis vinifera]
          Length = 129

 Score =  194 bits (492), Expect = 1e-47
 Identities = 92/131 (70%), Positives = 107/131 (81%)
 Frame = +2

Query: 50  MLLSVFLALFLPCTGMSAVFLVYICLLWYSASNGANQEFRLAEKPTSEKGLSAAELEKLP 229
           MLLS+FLALFLPC GMS VF+VYICLLWYSA  G   E     KP SEKGLSA++L+KLP
Sbjct: 1   MLLSIFLALFLPCAGMSVVFVVYICLLWYSAL-GQQPELPAPVKPESEKGLSASDLDKLP 59

Query: 230 KMTGKDLVMGSECAVCLDNIADDHQARLVPGCNHGFHIQCADTWLSKNSVCPVCRGKLHP 409
           K+ GKDLV+G+ECAVCLD I  D  ARL+PGCNHGFH+QCADTWLSK+SVCP+CR  L P
Sbjct: 60  KLAGKDLVVGAECAVCLDEIESDAPARLIPGCNHGFHLQCADTWLSKHSVCPLCRAILAP 119

Query: 410 ELFDSSEASPC 442
           E F++SE +PC
Sbjct: 120 EFFNTSE-NPC 129


>ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|222856402|gb|EEE93949.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  187 bits (476), Expect = 1e-45
 Identities = 86/125 (68%), Positives = 105/125 (84%)
 Frame = +2

Query: 50  MLLSVFLALFLPCTGMSAVFLVYICLLWYSASNGANQEFRLAEKPTSEKGLSAAELEKLP 229
           ML+SVFLALFLPC GMSAVF+VYICLLWY+A+N    E RL  K  +EKGLS++ELEKLP
Sbjct: 1   MLVSVFLALFLPCAGMSAVFIVYICLLWYTANN--QPEIRLPVKTVTEKGLSSSELEKLP 58

Query: 230 KMTGKDLVMGSECAVCLDNIADDHQARLVPGCNHGFHIQCADTWLSKNSVCPVCRGKLHP 409
           K+TGK+LV+G+ECAVCLD+I  +  AR+VPGCNHGFH++CADTWL+K  VCPVCR KL  
Sbjct: 59  KVTGKELVLGTECAVCLDDIESEQVARMVPGCNHGFHLECADTWLTKRPVCPVCRAKLDA 118

Query: 410 ELFDS 424
           +LF +
Sbjct: 119 QLFST 123


>ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|222843677|gb|EEE81224.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  180 bits (456), Expect = 2e-43
 Identities = 84/132 (63%), Positives = 105/132 (79%)
 Frame = +2

Query: 44  KKMLLSVFLALFLPCTGMSAVFLVYICLLWYSASNGANQEFRLAEKPTSEKGLSAAELEK 223
           + ML+SV  ALFLPC GMS VF +YICLLWY+A+N   +   L  K  +EKGLS++ELEK
Sbjct: 31  QNMLVSVLFALFLPCVGMSVVFFIYICLLWYAANNQP-ENIPLPVKTVTEKGLSSSELEK 89

Query: 224 LPKMTGKDLVMGSECAVCLDNIADDHQARLVPGCNHGFHIQCADTWLSKNSVCPVCRGKL 403
           LPK+TGK+LV+G+ECAVCLD+I  +  AR+VPGCNHGFH++CADTWLSK+ VCPVCR KL
Sbjct: 90  LPKVTGKELVLGTECAVCLDDIESEQLARIVPGCNHGFHLECADTWLSKHPVCPVCRAKL 149

Query: 404 HPELFDSSEASP 439
             + F S+ ASP
Sbjct: 150 DAQ-FSSTSASP 160


Top