BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034217
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...    58   2e-12
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...    58   2e-12
gb|ABA93644.1| retrotransposon protein, putative, Ty3-gypsy subc...    55   2e-11
gb|EEC80541.1| hypothetical protein OsI_22839 [Oryza sativa Indi...    56   1e-10
prf||1510387A retrotransposon del1-46                                  54   4e-09

>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
           gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
           kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
           Group] gi|31431495|gb|AAP53268.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1230

 Score = 57.8 bits (138), Expect(2) = 2e-12
 Identities = 28/78 (35%), Positives = 46/78 (58%)
 Frame = -3

Query: 724 FELLGSSDEQKISLASYQLEGSVYDWLMETRRVKGNEGDSVEPYTWGTFKESFKDKYFPR 545
           FE +G +D++KI  A+Y L+ S ++W  +  +   +E   +   TW  FKE+F  KYFP 
Sbjct: 102 FEAMGCTDKEKIIYATYMLQSSAFEW-WDAHKKSYSERIFI---TWELFKEAFYKKYFPE 157

Query: 544 RIRGKMESDFITLEQGEK 491
            ++   E +F+ L+QG K
Sbjct: 158 SVKRMKEKEFLELKQGNK 175



 Score = 40.0 bits (92), Expect(2) = 2e-12
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = -1

Query: 468 EFVRLAKYKSTLVVEKVNRARRFEKGLKNDINRQVAAFELNNYK 337
           EF RLA++    V    ++ARRFE GL+  + R+V AFEL  ++
Sbjct: 183 EFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFR 226


>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
           gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
           Japonica Group]
          Length = 443

 Score = 57.8 bits (138), Expect(2) = 2e-12
 Identities = 28/78 (35%), Positives = 46/78 (58%)
 Frame = -3

Query: 724 FELLGSSDEQKISLASYQLEGSVYDWLMETRRVKGNEGDSVEPYTWGTFKESFKDKYFPR 545
           FE +G +D++KI  A+Y L+ S ++W  +  +   +E   +   TW  FKE+F  KYFP 
Sbjct: 190 FEAMGCTDKEKIIYATYMLQSSAFEW-WDAHKKSYSERIFI---TWELFKEAFYKKYFPE 245

Query: 544 RIRGKMESDFITLEQGEK 491
            ++   E +F+ L+QG K
Sbjct: 246 SVKRMKEKEFLELKQGNK 263



 Score = 40.0 bits (92), Expect(2) = 2e-12
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = -1

Query: 468 EFVRLAKYKSTLVVEKVNRARRFEKGLKNDINRQVAAFELNNYK 337
           EF RLA++    V    ++ARRFE GL+  + R+V AFEL  ++
Sbjct: 271 EFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFR 314


>gb|ABA93644.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 423

 Score = 55.1 bits (131), Expect(2) = 2e-11
 Identities = 27/75 (36%), Positives = 48/75 (64%)
 Frame = -3

Query: 724 FELLGSSDEQKISLASYQLEGSVYDWLMETRRVKGNEGDSVEPYTWGTFKESFKDKYFPR 545
           FE +G +D++KI+ A+Y L+ S ++W  +  +   +E  S+   TW  FKE+F  KYFP 
Sbjct: 5   FEAMGCTDKEKITYATYMLQSSAFEW-WDAHKKSYSERISI---TWELFKEAFYKKYFPE 60

Query: 544 RIRGKMESDFITLEQ 500
            ++ +M+ +F+ L+Q
Sbjct: 61  SVK-RMKKEFLELKQ 74



 Score = 40.0 bits (92), Expect(2) = 2e-11
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = -1

Query: 468 EFVRLAKYKSTLVVEKVNRARRFEKGLKNDINRQVAAFELNNYK 337
           EF RLA++    V    ++ARRFE GL+  + R+V AFEL  ++
Sbjct: 75  EFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFR 118


>gb|EEC80541.1| hypothetical protein OsI_22839 [Oryza sativa Indica Group]
          Length = 285

 Score = 55.8 bits (133), Expect(2) = 1e-10
 Identities = 28/78 (35%), Positives = 46/78 (58%)
 Frame = -3

Query: 724 FELLGSSDEQKISLASYQLEGSVYDWLMETRRVKGNEGDSVEPYTWGTFKESFKDKYFPR 545
           FE +G +D++KI  A+Y L+ S ++W  +  +   +E  S+   TW  FKE+F  KYFP 
Sbjct: 84  FEAMGYTDKEKIIYATYMLQSSAFEW-WDAHKKSYSERISI---TWELFKEAFCKKYFPE 139

Query: 544 RIRGKMESDFITLEQGEK 491
            ++   E +F+ L+Q  K
Sbjct: 140 SVKRMKEKEFLELKQCNK 157



 Score = 36.6 bits (83), Expect(2) = 1e-10
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = -1

Query: 468 EFVRLAKYKSTLVVEKVNRARRFEKGLKNDINRQVAAFELNNYK 337
           EF RLA+     V    ++ARRFE GL+  + R V AFEL  ++
Sbjct: 165 EFSRLARLAPEFVQMDGSKARRFESGLRQPLKRCVEAFELTIFR 208


>prf||1510387A retrotransposon del1-46
          Length = 1443

 Score = 54.3 bits (129), Expect(2) = 4e-09
 Identities = 30/77 (38%), Positives = 45/77 (58%)
 Frame = -3

Query: 727 VFELLGSSDEQKISLASYQLEGSVYDWLMETRRVKGNEGDSVEPYTWGTFKESFKDKYFP 548
           + + LG +DEQK+ LAS+QL+G    W     +V+  E D+ +   W  F E F +K+FP
Sbjct: 87  ILDTLGVTDEQKVILASFQLQGEAEFWW--DAKVRSREDDTTQ-IKWDEFVEVFTEKFFP 143

Query: 547 RRIRGKMESDFITLEQG 497
             +R  +E  F+TL QG
Sbjct: 144 DTVRDDLER-FMTLVQG 159



 Score = 32.7 bits (73), Expect(2) = 4e-09
 Identities = 14/45 (31%), Positives = 28/45 (62%)
 Frame = -1

Query: 471 AEFVRLAKYKSTLVVEKVNRARRFEKGLKNDINRQVAAFELNNYK 337
           A+F  L++Y    V   + + +RFE+GLK  I +Q+++  + +Y+
Sbjct: 168 AKFEELSRYAPYQVDINIRKVKRFEQGLKLSITKQLSSHLIKDYR 212