BLASTX nr result

ID: Cnidium21_contig00034196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034196
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas]                          164   5e-39
ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitocho...   164   5e-39
ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitocho...   161   6e-38
ref|XP_002320749.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_002511770.1| conserved hypothetical protein [Ricinus comm...   154   9e-36

>dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas]
          Length = 415

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/114 (69%), Positives = 92/114 (80%)
 Frame = +1

Query: 1   RGLAVPALTRLAKNGYYGSLVPMVRDAFLMEELIRIDCKGLERSDYKKIGCKLRDLVPCK 180
           RGLAVPALT+LAKNGYY SLVPMVRDAFL  EL+RIDC+GLE+SDYKKIGCKLRDLVPC 
Sbjct: 293 RGLAVPALTKLAKNGYYASLVPMVRDAFLTNELVRIDCQGLEKSDYKKIGCKLRDLVPCI 352

Query: 181 LVTFDKEQIVIWRGNDYKPNEGGIFLTERESYDDRTDDGSAVNGESDNIGGNDN 342
           LVTF+KEQIV+WRG DYKP E G    +RE +DD   +GS++    D+   +DN
Sbjct: 353 LVTFEKEQIVVWRGKDYKPPEDGELFADREFFDD--PEGSSMGLSEDSCSSDDN 404


>ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera]
           gi|296089125|emb|CBI38828.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/117 (71%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   RGLAVPALTRLAKNGYYGSLVPMVRDAFLMEELIRIDCKGLERSDYKKIGCKLRDLVPCK 180
           RGLAVPALT+LAKNGYYGSLVPMVRDAFL +ELIRIDC+GLER DYKKIGCKLRD VPC 
Sbjct: 295 RGLAVPALTKLAKNGYYGSLVPMVRDAFLTDELIRIDCQGLERRDYKKIGCKLRDFVPCI 354

Query: 181 LVTFDKEQIVIWRGNDYKPNEGGIFLTERESYDDRTDDGSAVNGESDNI-GGNDNKR 348
           LVTF+KEQIV+WRG DYKP E G F  ERES D         N +SD + GG  +KR
Sbjct: 355 LVTFEKEQIVVWRGKDYKPTEAGQFPIERESLD---------NWDSDMVYGGKQHKR 402


>ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Cucumis
           sativus] gi|449480099|ref|XP_004155799.1| PREDICTED: LOW
           QUALITY PROTEIN: CRS2-associated factor 1,
           mitochondrial-like [Cucumis sativus]
          Length = 392

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/105 (75%), Positives = 90/105 (85%)
 Frame = +1

Query: 1   RGLAVPALTRLAKNGYYGSLVPMVRDAFLMEELIRIDCKGLERSDYKKIGCKLRDLVPCK 180
           +GLAVPALT+LAKNGYYGSLVPMVRDAFL  EL+RIDCKGLERSDYKKIGCKLRDLVPC 
Sbjct: 284 KGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCI 343

Query: 181 LVTFDKEQIVIWRGNDYKPNEGGIFLTERESYDDRTDDGSAVNGE 315
           LVTFDKEQIV+WRG DY+P + G +LT RE++DD   +   V+ E
Sbjct: 344 LVTFDKEQIVVWRGKDYQPLDTG-YLTVRETFDDVDGNTGCVDDE 387


>ref|XP_002320749.1| predicted protein [Populus trichocarpa] gi|222861522|gb|EEE99064.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/100 (73%), Positives = 87/100 (87%), Gaps = 2/100 (2%)
 Frame = +1

Query: 1   RGLAVPALTRLAKNGYYGSLVPMVRDAFLMEELIRIDCKGLERSDYKKIGCKLRDLVPCK 180
           RGLAVPALT+L++NGY+GSLVPMVRDAFL+ EL+RIDC+GL+RSD KKIGCKLRDLVPC 
Sbjct: 288 RGLAVPALTKLSRNGYFGSLVPMVRDAFLVSELVRIDCQGLDRSDSKKIGCKLRDLVPCI 347

Query: 181 LVTFDKEQIVIWRGNDYKP--NEGGIFLTERESYDDRTDD 294
           LVTFDKEQIV+WRG DYKP  +E G+F  +R+ +DD   D
Sbjct: 348 LVTFDKEQIVVWRGKDYKPPEDEDGLFFADRQPFDDPQSD 387


>ref|XP_002511770.1| conserved hypothetical protein [Ricinus communis]
           gi|223548950|gb|EEF50439.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 411

 Score =  154 bits (388), Expect = 9e-36
 Identities = 71/94 (75%), Positives = 82/94 (87%)
 Frame = +1

Query: 1   RGLAVPALTRLAKNGYYGSLVPMVRDAFLMEELIRIDCKGLERSDYKKIGCKLRDLVPCK 180
           +GLA+PALT+LAKNGYY SLVPMVRDAFL+ EL+RIDC+GL +SDYKKIGCKLRDLVPC 
Sbjct: 288 KGLALPALTKLAKNGYYASLVPMVRDAFLVNELVRIDCQGLPKSDYKKIGCKLRDLVPCI 347

Query: 181 LVTFDKEQIVIWRGNDYKPNEGGIFLTERESYDD 282
           LVTF+KEQIV+WRG DYKP E G    +RE +DD
Sbjct: 348 LVTFEKEQIVVWRGKDYKPPEYGQSFVDRECFDD 381


Top