BLASTX nr result

ID: Cnidium21_contig00034190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034190
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39565.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like...   127   7e-28
emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]   127   1e-27
gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japo...   111   5e-23
ref|NP_001049864.1| Os03g0301400 [Oryza sativa Japonica Group] g...   111   5e-23

>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/92 (65%), Positives = 76/92 (82%)
 Frame = -2

Query: 370 EFSRCSIEIPKDWLFMDTLPLARELVKSGGPNCPSKTSLQALREHYKIPLVGSAHRAMSD 191
           EFSRC+ E+P +W F+DTLPLAREL+KS G + P   SLQALRE+Y+IPLVG AHR +SD
Sbjct: 231 EFSRCNTEVPPNWRFLDTLPLARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSD 290

Query: 190 VYSLSLVLQRMTFDLKVPISGLVDRSFKASEI 95
           VY+LS VLQ +TF+LKV ++ L+DRSF AS+I
Sbjct: 291 VYTLSQVLQMLTFNLKVSVANLLDRSFTASDI 322


>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
           vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED:
           DNA polymerase III polC-type-like isoform 1 [Vitis
           vinifera]
          Length = 337

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/92 (65%), Positives = 76/92 (82%)
 Frame = -2

Query: 370 EFSRCSIEIPKDWLFMDTLPLARELVKSGGPNCPSKTSLQALREHYKIPLVGSAHRAMSD 191
           EFSRC+ E+P +W F+DTLPLAREL+KS G + P   SLQALRE+Y+IPLVG AHR +SD
Sbjct: 236 EFSRCNTEVPPNWRFLDTLPLARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSD 295

Query: 190 VYSLSLVLQRMTFDLKVPISGLVDRSFKASEI 95
           VY+LS VLQ +TF+LKV ++ L+DRSF AS+I
Sbjct: 296 VYTLSQVLQMLTFNLKVSVANLLDRSFTASDI 327


>emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]
          Length = 340

 Score =  127 bits (319), Expect = 1e-27
 Identities = 59/92 (64%), Positives = 76/92 (82%)
 Frame = -2

Query: 370 EFSRCSIEIPKDWLFMDTLPLARELVKSGGPNCPSKTSLQALREHYKIPLVGSAHRAMSD 191
           EFSRC+ E+P +W FMDTLPLARE +KS G + PS  SLQALRE+++IPLVG AHR +SD
Sbjct: 239 EFSRCNTEVPPNWRFMDTLPLAREFIKSAGSDLPSGASLQALREYFRIPLVGPAHRVLSD 298

Query: 190 VYSLSLVLQRMTFDLKVPISGLVDRSFKASEI 95
           VY+LS +LQ +TF+LKV ++ L+DRSF AS+I
Sbjct: 299 VYTLSQILQMLTFNLKVSVANLLDRSFTASDI 330


>gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japonica Group]
          Length = 901

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/94 (58%), Positives = 71/94 (75%)
 Frame = -2

Query: 370  EFSRCSIEIPKDWLFMDTLPLARELVKSGGPNCPSKTSLQALREHYKIPLVGSAHRAMSD 191
            EF R  IE+P DWLF+DTLP+AR+L+ S G    S  SL  LREHYKIPL GSAHRAM D
Sbjct: 804  EFQRSKIEMPGDWLFVDTLPIARQLIGSDGEKLKS-VSLDNLREHYKIPLAGSAHRAMQD 862

Query: 190  VYSLSLVLQRMTFDLKVPISGLVDRSFKASEISI 89
            V +L  VLQ++TF+LK+ +  L++RSF+ S++SI
Sbjct: 863  VITLCYVLQKLTFELKLTVPQLLERSFRVSDLSI 896


>ref|NP_001049864.1| Os03g0301400 [Oryza sativa Japonica Group]
           gi|108707691|gb|ABF95486.1| exonuclease family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113548335|dbj|BAF11778.1| Os03g0301400 [Oryza sativa
           Japonica Group] gi|215678888|dbj|BAG95325.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 313

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/94 (58%), Positives = 71/94 (75%)
 Frame = -2

Query: 370 EFSRCSIEIPKDWLFMDTLPLARELVKSGGPNCPSKTSLQALREHYKIPLVGSAHRAMSD 191
           EF R  IE+P DWLF+DTLP+AR+L+ S G    S  SL  LREHYKIPL GSAHRAM D
Sbjct: 216 EFQRSKIEMPGDWLFVDTLPIARQLIGSDGEKLKS-VSLDNLREHYKIPLAGSAHRAMQD 274

Query: 190 VYSLSLVLQRMTFDLKVPISGLVDRSFKASEISI 89
           V +L  VLQ++TF+LK+ +  L++RSF+ S++SI
Sbjct: 275 VITLCYVLQKLTFELKLTVPQLLERSFRVSDLSI 308


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