BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034170
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95357.2| retrotransposon protein, putative, unclassified [...   103   2e-20
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]               101   6e-20
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...    99   4e-19
gb|ABF94845.1| retrotransposon protein, putative, unclassified [...    98   8e-19
gb|ABF96573.1| retrotransposon protein, putative, unclassified, ...    98   8e-19

>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/110 (41%), Positives = 69/110 (62%)
 Frame = +2

Query: 2    ELLDSLDGDNEAQEWMAKLTIAGTEIDGHSLVNGVLKRNGRYYVGSKGLLREKVCEAIHC 181
            EL+D    D+EAQ+ +  L+++G       + NG+L    R ++G   LL++K+   +H 
Sbjct: 2292 ELIDGYQSDSEAQKLLQALSVSGAGPSNFEVQNGILYFKHRIWIGHNKLLQQKILANLHT 2351

Query: 182  SMEGGHSGIAASIKRAESLFYWPGIRKDITTFVKECDICQRNKSEHIPSP 331
            +  GGHSGI  + +R + LF WPG+RKD+  FV+ CDICQR KSEH+  P
Sbjct: 2352 AAVGGHSGILVTYQRVKQLFSWPGMRKDVQEFVQHCDICQRAKSEHVKYP 2401


>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
          Length = 1265

 Score =  101 bits (252), Expect = 6e-20
 Identities = 45/110 (40%), Positives = 69/110 (62%)
 Frame = +2

Query: 2    ELLDSLDGDNEAQEWMAKLTIAGTEIDGHSLVNGVLKRNGRYYVGSKGLLREKVCEAIHC 181
            EL+     D+EAQ+ +  L+++G       ++NG+L    R ++G   LL++K+   +H 
Sbjct: 1078 ELIAGYQSDSEAQKLLQALSVSGAGPSNFEVLNGILYFKHRIWIGHNKLLQQKILANLHT 1137

Query: 182  SMEGGHSGIAASIKRAESLFYWPGIRKDITTFVKECDICQRNKSEHIPSP 331
            +  GGHSGI  + +R + LF WPG+RKD+  FV+ CDICQR KSEH+  P
Sbjct: 1138 TAVGGHSGILVTYQRVKQLFSWPGLRKDVQEFVQHCDICQRAKSEHVKYP 1187


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/107 (43%), Positives = 67/107 (62%)
 Frame = +2

Query: 11   DSLDGDNEAQEWMAKLTIAGTEIDGHSLVNGVLKRNGRYYVGSKGLLREKVCEAIHCSME 190
            +S   D   +E M +LT+A     G++L  GVL+  GR YVG    LR  +  ++H S  
Sbjct: 869  NSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAV 928

Query: 191  GGHSGIAASIKRAESLFYWPGIRKDITTFVKECDICQRNKSEHIPSP 331
            GGHSG  A+ +R + LFYWPG++K+I T V+EC +CQR+K+EH   P
Sbjct: 929  GGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYP 975


>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 937

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/110 (39%), Positives = 68/110 (61%)
 Frame = +2

Query: 2   ELLDSLDGDNEAQEWMAKLTIAGTEIDGHSLVNGVLKRNGRYYVGSKGLLREKVCEAIHC 181
           E+++S   D +AQ+ +A+L +      G+SL  G+++   + ++GS   L  K+ +A H 
Sbjct: 444 EMINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSNAGLHTKLIQAFHA 503

Query: 182 SMEGGHSGIAASIKRAESLFYWPGIRKDITTFVKECDICQRNKSEHIPSP 331
           S  GGHSGIAA+  R + LF WPG++ D+  FVK+C +CQ+ K EH   P
Sbjct: 504 SALGGHSGIAATYHRIKKLFAWPGLKLDVENFVKQCQVCQQAKHEHCRLP 553


>gb|ABF96573.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1481

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/110 (39%), Positives = 68/110 (61%)
 Frame = +2

Query: 2    ELLDSLDGDNEAQEWMAKLTIAGTEIDGHSLVNGVLKRNGRYYVGSKGLLREKVCEAIHC 181
            E+++S   D +AQ+ +A+L +      G+SL  G+++   + ++GS   L  K+ +A H 
Sbjct: 1003 EVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSNAGLHTKLIQAFHA 1062

Query: 182  SMEGGHSGIAASIKRAESLFYWPGIRKDITTFVKECDICQRNKSEHIPSP 331
            S  GGHSGIAA+  R + LF WPG++ D+  FVK+C +CQ+ K EH   P
Sbjct: 1063 SALGGHSGIAATYHRIKKLFAWPGLKLDVENFVKQCQVCQQAKHEHCQLP 1112