BLASTX nr result

ID: Cnidium21_contig00034142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034142
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   94   1e-17
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    93   3e-17
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    93   3e-17
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    92   4e-17
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    91   7e-17

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/100 (46%), Positives = 61/100 (61%)
 Frame = +3

Query: 3   FAFKINGALEGYFPGRSGLRQGDPLSPYLFVLAMEVLTVCINHLTNSESFSFHWRAKQAG 182
           F+  ING L GYF GR GLRQGDPLSPYLF+++MEVL+  ++        S H +     
Sbjct: 85  FSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPV 144

Query: 183 LTHLVFADDFFLFCKGDATSINLLMQSVTSFSNISGLRPN 302
           +THL FADD  +F  G+  S+  +  ++ SFS  SGL  N
Sbjct: 145 ITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLN 184


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   FAFKINGALEGYFPGRSGLRQGDPLSPYLFVLAMEVLTVCINHLTNSESFSFHWRAKQAG 182
           + F ING L   F  + GLRQGDP+SPYLFV+ ME L +C+  L  + +F FH R K+  
Sbjct: 306 YTFNINGDLTRPFAAKKGLRQGDPISPYLFVICMEYLNICLIQLRKNAAFRFHPRCKRLN 365

Query: 183 LTHLVFADDFFLFCKGDATSINLLMQSVTSFSNIS 287
           L H+ F DD  LF +GD  S++ L ++ + FS  S
Sbjct: 366 LIHVCFVDDLLLFSRGDVDSVSQLFEAFSLFSAAS 400


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/98 (43%), Positives = 65/98 (66%)
 Frame = +3

Query: 3   FAFKINGALEGYFPGRSGLRQGDPLSPYLFVLAMEVLTVCINHLTNSESFSFHWRAKQAG 182
           ++  +NG     F  + GLRQGDPLSP+LF L+ME L+ C+ ++     F+FH + ++  
Sbjct: 626 YSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIK 685

Query: 183 LTHLVFADDFFLFCKGDATSINLLMQSVTSFSNISGLR 296
           LTHL+FADD  +F + DA+SI+ +M +  SFS  SGL+
Sbjct: 686 LTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQ 723


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/101 (42%), Positives = 65/101 (64%)
 Frame = +3

Query: 3   FAFKINGALEGYFPGRSGLRQGDPLSPYLFVLAMEVLTVCINHLTNSESFSFHWRAKQAG 182
           F   +NG   G+F    GLRQGDPLSPYLFVLAMEV +  +N   +S    +H +A    
Sbjct: 610 FTVSVNGCCGGFFKSAKGLRQGDPLSPYLFVLAMEVFSKLLNSRFDSGYIRYHPKASDLS 669

Query: 183 LTHLVFADDFFLFCKGDATSINLLMQSVTSFSNISGLRPNN 305
           ++HL+FADD  +F  G ++S++ + +++  F++ SGL+ NN
Sbjct: 670 ISHLMFADDVMIFFDGGSSSLHGICETLEDFASWSGLKVNN 710


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/97 (42%), Positives = 62/97 (63%)
 Frame = +3

Query: 3   FAFKINGALEGYFPGRSGLRQGDPLSPYLFVLAMEVLTVCINHLTNSESFSFHWRAKQAG 182
           ++  +NG     F  R GLRQGDP+SP+LF L ME L+ C+  L  S  F+FH + ++  
Sbjct: 623 YSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLN 682

Query: 183 LTHLVFADDFFLFCKGDATSINLLMQSVTSFSNISGL 293
           +THL+FADD  +FC+ D +S++ +  +   FS+ SGL
Sbjct: 683 ITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGL 719


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