BLASTX nr result

ID: Cnidium21_contig00034137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034137
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276231.1| PREDICTED: zinc transporter 6, chloroplastic...   164   9e-39
ref|XP_002514504.1| zinc/iron transporter, putative [Ricinus com...   163   2e-38
ref|XP_003615761.1| Zinc transporter [Medicago truncatula] gi|35...   160   8e-38
ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222...   160   1e-37
ref|NP_180569.1| zinc transporter 6 [Arabidopsis thaliana] gi|37...   158   5e-37

>ref|XP_002276231.1| PREDICTED: zinc transporter 6, chloroplastic [Vitis vinifera]
           gi|297745865|emb|CBI15921.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score =  164 bits (414), Expect = 9e-39
 Identities = 98/178 (55%), Positives = 110/178 (61%), Gaps = 4/178 (2%)
 Frame = -1

Query: 523 GVAAAHLKXXXXXXXXXXXXXXXXLPVLLARLFQGNPAYDKAVLLIKCFAAGVILSTSLV 344
           G AAAHLK                 PV+LAR+FQG P YDKA+L+IKCFAAGVILSTSLV
Sbjct: 17  GRAAAHLKLVSIFVIFITSVVGISSPVMLARVFQGKPMYDKAILIIKCFAAGVILSTSLV 76

Query: 343 HVLPDAFNALADCQVASHHPWKDFPFSGLVTLIGVLMALLVDLTXXXXXXXXXXXSEYKP 164
           HVLPDAF AL+DC VASHHPWKDFPFSGLVT+IG ++ALLVDLT           S Y P
Sbjct: 77  HVLPDAFAALSDCHVASHHPWKDFPFSGLVTMIGAILALLVDLT-ASAHVDSHKPSHYTP 135

Query: 163 I-VAEMKCCGVKNMEDLESDNQEI---XXXXXXXXXXXXKQRLVSQVLEIGIIFHSVI 2
           I   E      K + +   +   +               KQRLVSQVLEIGIIFHSVI
Sbjct: 136 IGTQEELPTHAKKLTEFRVETAVLSVSCPDKQGEELVKLKQRLVSQVLEIGIIFHSVI 193


>ref|XP_002514504.1| zinc/iron transporter, putative [Ricinus communis]
           gi|223546403|gb|EEF47904.1| zinc/iron transporter,
           putative [Ricinus communis]
          Length = 330

 Score =  163 bits (412), Expect = 2e-38
 Identities = 89/154 (57%), Positives = 105/154 (68%), Gaps = 5/154 (3%)
 Frame = -1

Query: 448 PVLLARLFQGNPAYDKAVLLIKCFAAGVILSTSLVHVLPDAFNALADCQVASHHPWKDFP 269
           PVLLAR FQG P YDKAVLLIKCFAAGVILSTSLVHVLPDA+ AL+DCQVAS HPWKDFP
Sbjct: 35  PVLLARYFQGKPLYDKAVLLIKCFAAGVILSTSLVHVLPDAYEALSDCQVASKHPWKDFP 94

Query: 268 FSGLVTLIGVLMALLVDLT-----XXXXXXXXXXXSEYKPIVAEMKCCGVKNMEDLESDN 104
           F+GLVTL+G L+AL VD+T                 EY P+  + +  G K++E  + + 
Sbjct: 95  FAGLVTLVGALLALFVDITASAHVEHGHGESKEAILEYTPVGTQEEIVGKKSVELSKIEL 154

Query: 103 QEIXXXXXXXXXXXXKQRLVSQVLEIGIIFHSVI 2
            +             KQ+L+SQVLEIGIIFHSVI
Sbjct: 155 GDHKGREREEYLVKLKQKLISQVLEIGIIFHSVI 188


>ref|XP_003615761.1| Zinc transporter [Medicago truncatula] gi|355517096|gb|AES98719.1|
           Zinc transporter [Medicago truncatula]
          Length = 318

 Score =  160 bits (406), Expect = 8e-38
 Identities = 97/174 (55%), Positives = 108/174 (62%)
 Frame = -1

Query: 523 GVAAAHLKXXXXXXXXXXXXXXXXLPVLLARLFQGNPAYDKAVLLIKCFAAGVILSTSLV 344
           G AA+HLK                 PVLLAR+FQG P YD+A++LIKCFAAGVILSTSLV
Sbjct: 18  GAAASHLKIISLFVIFITSAVGMTAPVLLARVFQGKPLYDRALVLIKCFAAGVILSTSLV 77

Query: 343 HVLPDAFNALADCQVASHHPWKDFPFSGLVTLIGVLMALLVDLTXXXXXXXXXXXSEYKP 164
           HVLPDA+ ALADC VAS HPWKDFPFSGLVTLIG ++AL VDL             +Y P
Sbjct: 78  HVLPDAYAALADCHVASRHPWKDFPFSGLVTLIGAILALFVDLV----ASSHVEHGQYAP 133

Query: 163 IVAEMKCCGVKNMEDLESDNQEIXXXXXXXXXXXXKQRLVSQVLEIGIIFHSVI 2
           +       G K ME LE    +             KQRLVSQVLEIGIIFHSVI
Sbjct: 134 V-------GEKEME-LEGGEGD---CERGEELIKLKQRLVSQVLEIGIIFHSVI 176


>ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222849652|gb|EEE87199.1|
           ZIP transporter [Populus trichocarpa]
          Length = 335

 Score =  160 bits (405), Expect = 1e-37
 Identities = 97/179 (54%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
 Frame = -1

Query: 517 AAAHLKXXXXXXXXXXXXXXXXLPVLLARLFQGNPAYDKAVLLIKCFAAGVILSTSLVHV 338
           AA HLK                 PVLLAR FQG P YDKA L+IKCFAAGVILSTSLVHV
Sbjct: 20  AATHLKLISILIIFFTSIIGISFPVLLARYFQGKPVYDKATLIIKCFAAGVILSTSLVHV 79

Query: 337 LPDAFNALADCQVASHHPWKDFPFSGLVTLIGVLMALLVDLT-------XXXXXXXXXXX 179
           LPDAF AL+DC VAS HPWKDFPF+GL+TLIGVL+ALLVDLT                  
Sbjct: 80  LPDAFGALSDCHVASKHPWKDFPFAGLITLIGVLLALLVDLTASAHVEQHGQGHGDGDGD 139

Query: 178 SEYKPIVAEMKCCGVKNMEDLESDNQEIXXXXXXXXXXXXKQRLVSQVLEIGIIFHSVI 2
            EY  +  + +  G K      SD                KQRLVSQVLEIGIIFHSVI
Sbjct: 140 GEYTVVGTQEEMVGKK-----VSDMSVRVEIMGEVDLVKVKQRLVSQVLEIGIIFHSVI 193


>ref|NP_180569.1| zinc transporter 6 [Arabidopsis thaliana]
           gi|37090161|sp|O64738.1|ZIP6_ARATH RecName: Full=Zinc
           transporter 6, chloroplastic; AltName: Full=ZRT/IRT-like
           protein 6; Flags: Precursor
           gi|17385786|gb|AAL38433.1|AF369910_1 putative metal
           transporter ZIP6 [Arabidopsis thaliana]
           gi|3150412|gb|AAC16964.1| putative Fe(II) transport
           protein [Arabidopsis thaliana]
           gi|20197229|gb|AAM14983.1| putative Fe(II) transport
           protein [Arabidopsis thaliana]
           gi|330253248|gb|AEC08342.1| zinc transporter 6
           [Arabidopsis thaliana]
          Length = 341

 Score =  158 bits (399), Expect = 5e-37
 Identities = 98/186 (52%), Positives = 113/186 (60%), Gaps = 12/186 (6%)
 Frame = -1

Query: 523 GVAAAHLKXXXXXXXXXXXXXXXXLPVLLARLFQGNPAYDKAVLLIKCFAAGVILSTSLV 344
           G  A+HLK                 PVLLA+ F G P YDKA+L+IKCFAAGVILSTSLV
Sbjct: 20  GEEASHLKIVAVFAIFLTSVFGVWGPVLLAKYFHGKPLYDKAILVIKCFAAGVILSTSLV 79

Query: 343 HVLPDAFNALADCQVASHHPWKDFPFSGLVTLIGVLMALLVDLT-----XXXXXXXXXXX 179
           HVLP+AF +LADCQV+S HPWKDFPF+GLVT+IG + ALLVDLT                
Sbjct: 80  HVLPEAFESLADCQVSSRHPWKDFPFAGLVTMIGAITALLVDLTASEHMGHGGGGGGDGG 139

Query: 178 SEYKPI-----VAEMK--CCGVKNMEDLESDNQEIXXXXXXXXXXXXKQRLVSQVLEIGI 20
            EY P+       EMK   CG  ++E  E+  +EI            KQRLVSQVLEIGI
Sbjct: 140 MEYMPVGKAVGGLEMKEGKCGA-DLEIQENSEEEI---------VKMKQRLVSQVLEIGI 189

Query: 19  IFHSVI 2
           IFHSVI
Sbjct: 190 IFHSVI 195


Top