BLASTX nr result

ID: Cnidium21_contig00034136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034136
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30150.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   105   3e-21
ref|XP_002519475.1| protein binding protein, putative [Ricinus c...   102   2e-20
ref|XP_003625697.1| RING finger and WD repeat domain-containing ...   102   4e-20
ref|XP_003520658.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   101   7e-20

>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  105 bits (263), Expect = 3e-21
 Identities = 43/58 (74%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
 Frame = +3

Query: 138 NEIDGLCCPICMEPWSSQGVHQVCCLPCGHIYGLSCIQKWIRQ-RQSSRKCPQCKRSC 308
           ++IDGLCCPICME W+S G HQVCCLPCGHIYG+SCI+KW +Q  +SS KCPQCKR C
Sbjct: 102 DQIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWFQQCGRSSGKCPQCKRKC 159


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score =  105 bits (263), Expect = 3e-21
 Identities = 43/58 (74%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
 Frame = +3

Query: 138 NEIDGLCCPICMEPWSSQGVHQVCCLPCGHIYGLSCIQKWIRQ-RQSSRKCPQCKRSC 308
           ++IDGLCCPICME W+S G HQVCCLPCGHIYG+SCI+KW +Q  +SS KCPQCKR C
Sbjct: 102 DQIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWFQQCGRSSGKCPQCKRKC 159


>ref|XP_002519475.1| protein binding protein, putative [Ricinus communis]
           gi|223541338|gb|EEF42889.1| protein binding protein,
           putative [Ricinus communis]
          Length = 606

 Score =  102 bits (255), Expect = 2e-20
 Identities = 37/59 (62%), Positives = 48/59 (81%)
 Frame = +3

Query: 132 DNNEIDGLCCPICMEPWSSQGVHQVCCLPCGHIYGLSCIQKWIRQRQSSRKCPQCKRSC 308
           + NEI+GL CPICM+ W+S+G H +CCLPCGH++GLSCI KW++Q +S  KCPQC R C
Sbjct: 104 NRNEIEGLFCPICMDAWTSEGDHHICCLPCGHLFGLSCISKWLKQNRSKAKCPQCNRKC 162


>ref|XP_003625697.1| RING finger and WD repeat domain-containing protein [Medicago
           truncatula] gi|355500712|gb|AES81915.1| RING finger and
           WD repeat domain-containing protein [Medicago
           truncatula]
          Length = 596

 Score =  102 bits (253), Expect = 4e-20
 Identities = 35/60 (58%), Positives = 51/60 (85%)
 Frame = +3

Query: 132 DNNEIDGLCCPICMEPWSSQGVHQVCCLPCGHIYGLSCIQKWIRQRQSSRKCPQCKRSCN 311
           +  +IDGL CPICM+ W+++G H +CCLPCGHIYG+SC++KW++Q+++S KCPQC R C+
Sbjct: 121 NRTDIDGLICPICMDAWTNEGDHHICCLPCGHIYGMSCVRKWLQQKKNSGKCPQCNRRCS 180


>ref|XP_003520658.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Glycine max]
          Length = 631

 Score =  101 bits (251), Expect = 7e-20
 Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
 Frame = +3

Query: 102 CYSTEDLMSKDNN----EIDGLCCPICMEPWSSQGVHQVCCLPCGHIYGLSCIQKWIRQR 269
           C      +S++N     ++DGL CPICM+ W++ G H +CCLPCGHIYG+SCI+KW++ R
Sbjct: 103 CSFANGSLSQENEWASPDVDGLLCPICMDAWTNNGEHHICCLPCGHIYGMSCIKKWLQHR 162

Query: 270 QSSRKCPQCKRSCN 311
           ++S KCPQCK  C+
Sbjct: 163 RNSNKCPQCKVKCS 176


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