BLASTX nr result

ID: Cnidium21_contig00034135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034135
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_003529327.1| PREDICTED: GTP-binding protein At2g22870-lik...   400   e-109
ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus ...   400   e-109
ref|XP_003541533.1| PREDICTED: GTP-binding protein At2g22870-lik...   399   e-109
ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] g...   388   e-105

>ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|222853234|gb|EEE90781.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  409 bits (1050), Expect = e-112
 Identities = 203/263 (77%), Positives = 219/263 (83%), Gaps = 9/263 (3%)
 Frame = -2

Query: 788 PIPRSSHHISA--TPKPT-------LKNPILFIPPGVDPDEVTDQIILPGSNIVVGPYAG 636
           P    S H+SA  T KP            +LF+PPGVDPD+VT++IILPGSNIVVGPYAG
Sbjct: 39  PNRNPSGHVSASKTSKPPPLSDVARFVRTVLFVPPGVDPDKVTEEIILPGSNIVVGPYAG 98

Query: 635 DSKIKQVEFMGSSVRPKDCPKDDRPEFAMLGRSNVGKSSLINTLVRKKEVALTSKKPGKT 456
            S+IK+VEF+ SS R KDCP+DDRPEFA+LGRSNVGKSSLIN L RKKEVALTSKKPGKT
Sbjct: 99  HSQIKEVEFVKSSGRAKDCPRDDRPEFAILGRSNVGKSSLINVLARKKEVALTSKKPGKT 158

Query: 455 QLINHFLVNKSWYLVDLPGYGFANAPESARMDWSSFTKGYFLNRETXXXXXXXXXXXVPP 276
           QLINHFLVNKSWYLVDLPGYGFA AP+SARMDWSSFTKGYFLNRET           VPP
Sbjct: 159 QLINHFLVNKSWYLVDLPGYGFAKAPDSARMDWSSFTKGYFLNRETLVAVLLLIDASVPP 218

Query: 275 QKIDLDCANWLGRNNIAMTLVFTKCDKMKGGKGKRPDENIKSFQELIRQNYKIHPPWIMT 96
           QKIDLDCANWLGRNNI MTLVFTKCDKMKGGK  RPDENIK+FQEL+RQNY+ HP WIMT
Sbjct: 219 QKIDLDCANWLGRNNIPMTLVFTKCDKMKGGKRTRPDENIKNFQELMRQNYREHPAWIMT 278

Query: 95  SSATGLGRDDLLLHMSQLRNYWD 27
           SS TGLGRD+LLLHMSQLRNYWD
Sbjct: 279 SSVTGLGRDELLLHMSQLRNYWD 301


>ref|XP_003529327.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
          Length = 301

 Score =  400 bits (1029), Expect = e-109
 Identities = 192/257 (74%), Positives = 213/257 (82%), Gaps = 1/257 (0%)
 Frame = -2

Query: 794 QNPIPRSSHHISATPKPTLKNPI-LFIPPGVDPDEVTDQIILPGSNIVVGPYAGDSKIKQ 618
           ++P+  S+H    T  P       LFIPPG++PDEV D  +LPGSNI VGPYAGDS IK 
Sbjct: 44  RHPLSHSTHASKTTTSPPPSFEFQLFIPPGIEPDEVNDSTVLPGSNIAVGPYAGDSHIKD 103

Query: 617 VEFMGSSVRPKDCPKDDRPEFAMLGRSNVGKSSLINTLVRKKEVALTSKKPGKTQLINHF 438
           V+F+ SS R +DCPKD+RPEFA+LGRSNVGKSSLIN+LVRKKE+ALTSKKPGKTQLINHF
Sbjct: 104 VQFVKSSARARDCPKDNRPEFAVLGRSNVGKSSLINSLVRKKEIALTSKKPGKTQLINHF 163

Query: 437 LVNKSWYLVDLPGYGFANAPESARMDWSSFTKGYFLNRETXXXXXXXXXXXVPPQKIDLD 258
           LVNKSWYLVDLPGYGFA APE+A+ DWSSFTKGYFLN+ T           VPPQKIDLD
Sbjct: 164 LVNKSWYLVDLPGYGFAKAPEAAKTDWSSFTKGYFLNKSTLVAVLLLIDASVPPQKIDLD 223

Query: 257 CANWLGRNNIAMTLVFTKCDKMKGGKGKRPDENIKSFQELIRQNYKIHPPWIMTSSATGL 78
           CANWLGRNNI +T VFTKCDKMK  KGKRPDENI+ FQELIRQNYK HPPWIMTSSATG+
Sbjct: 224 CANWLGRNNIPITFVFTKCDKMKVAKGKRPDENIRDFQELIRQNYKQHPPWIMTSSATGM 283

Query: 77  GRDDLLLHMSQLRNYWD 27
           GRD+LLLHMSQLRNYWD
Sbjct: 284 GRDELLLHMSQLRNYWD 300


>ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus communis]
           gi|223535455|gb|EEF37125.1| GTP-binding protein engB,
           putative [Ricinus communis]
          Length = 296

 Score =  400 bits (1029), Expect = e-109
 Identities = 193/258 (74%), Positives = 215/258 (83%), Gaps = 6/258 (2%)
 Frame = -2

Query: 782 PRSSHHISATPKPTLKNP------ILFIPPGVDPDEVTDQIILPGSNIVVGPYAGDSKIK 621
           P      S T KP+  +       +LF+PPGVDPDEVT+ ++LPGSNIVVGPYAG S+IK
Sbjct: 38  PHPKFSASKTAKPSTADSARFARTVLFVPPGVDPDEVTENMVLPGSNIVVGPYAGHSQIK 97

Query: 620 QVEFMGSSVRPKDCPKDDRPEFAMLGRSNVGKSSLINTLVRKKEVALTSKKPGKTQLINH 441
           +VEF+ SS R +DCP++DRPEFA+LGRSNVGKSSLIN LVRKKEVALTSKKPGKTQLINH
Sbjct: 98  EVEFVKSSSRARDCPREDRPEFAILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINH 157

Query: 440 FLVNKSWYLVDLPGYGFANAPESARMDWSSFTKGYFLNRETXXXXXXXXXXXVPPQKIDL 261
           FLVNKSWY+VDLPGYGFA AP SA+ DWSSFTKGYFLNRET           VPPQKIDL
Sbjct: 158 FLVNKSWYIVDLPGYGFAKAPASAQTDWSSFTKGYFLNRETLVAVLLLIDASVPPQKIDL 217

Query: 260 DCANWLGRNNIAMTLVFTKCDKMKGGKGKRPDENIKSFQELIRQNYKIHPPWIMTSSATG 81
           DCA+WLGRNNI +T VFTKCDKMKGGK  RPDENI++FQELIRQNY+ HPPWIMTSS TG
Sbjct: 218 DCADWLGRNNIPLTFVFTKCDKMKGGKSTRPDENIRNFQELIRQNYQEHPPWIMTSSVTG 277

Query: 80  LGRDDLLLHMSQLRNYWD 27
           LGRD+LLLHMSQLRNYWD
Sbjct: 278 LGRDELLLHMSQLRNYWD 295


>ref|XP_003541533.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
          Length = 305

 Score =  399 bits (1025), Expect = e-109
 Identities = 193/257 (75%), Positives = 213/257 (82%), Gaps = 8/257 (3%)
 Frame = -2

Query: 773 SHHISATPKPTLKNPI--------LFIPPGVDPDEVTDQIILPGSNIVVGPYAGDSKIKQ 618
           SH  +A+  PT  NP+        LFIPPG++PDEV D  +LPGSNI VGPYAGDS+IK 
Sbjct: 49  SHSSNASKTPTT-NPLPSSSFESQLFIPPGIEPDEVDDSTVLPGSNIAVGPYAGDSRIKD 107

Query: 617 VEFMGSSVRPKDCPKDDRPEFAMLGRSNVGKSSLINTLVRKKEVALTSKKPGKTQLINHF 438
           V+F+ SS R +DCPKDD PEFA+LGRSNVGKSSLIN+LVRKKE+ALTSKKPGKTQLINHF
Sbjct: 108 VQFVKSSARARDCPKDDLPEFAVLGRSNVGKSSLINSLVRKKEIALTSKKPGKTQLINHF 167

Query: 437 LVNKSWYLVDLPGYGFANAPESARMDWSSFTKGYFLNRETXXXXXXXXXXXVPPQKIDLD 258
           LVNKSWYLVDLPGYGFA APE+A+ DWSSFTKGYFLNR T           VPPQK+DLD
Sbjct: 168 LVNKSWYLVDLPGYGFAKAPEAAKTDWSSFTKGYFLNRSTLVAVLLLIDASVPPQKVDLD 227

Query: 257 CANWLGRNNIAMTLVFTKCDKMKGGKGKRPDENIKSFQELIRQNYKIHPPWIMTSSATGL 78
           CANWLGRNNI +T VFTKCDKMK  KGKRPDENI+ FQELIRQNYK HPPWIMTSS TG+
Sbjct: 228 CANWLGRNNIPITFVFTKCDKMKVAKGKRPDENIRDFQELIRQNYKQHPPWIMTSSVTGM 287

Query: 77  GRDDLLLHMSQLRNYWD 27
           GRD+LLLHMSQLRNYWD
Sbjct: 288 GRDELLLHMSQLRNYWD 304


>ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
           gi|297324479|gb|EFH54899.1| EMB2001 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 300

 Score =  388 bits (996), Expect = e-105
 Identities = 182/255 (71%), Positives = 213/255 (83%)
 Frame = -2

Query: 791 NPIPRSSHHISATPKPTLKNPILFIPPGVDPDEVTDQIILPGSNIVVGPYAGDSKIKQVE 612
           NP   ++  IS   K      +LFIPPGV+ +E+TD ++LPGSNIV+GP+AG S+IK+VE
Sbjct: 47  NPATTTNRSISDAAK--FAKSVLFIPPGVEIEELTDDMVLPGSNIVIGPFAGHSQIKEVE 104

Query: 611 FMGSSVRPKDCPKDDRPEFAMLGRSNVGKSSLINTLVRKKEVALTSKKPGKTQLINHFLV 432
           F+ SS R +DCPKDDRPE A+LGRSNVGKSSLIN LVRKKEVALTSKKPGKTQLINHFLV
Sbjct: 105 FVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLV 164

Query: 431 NKSWYLVDLPGYGFANAPESARMDWSSFTKGYFLNRETXXXXXXXXXXXVPPQKIDLDCA 252
           NKSWY+VDLPGYGFA   ++A+ DWS+FTKGYFLNR+T           VPPQKIDLDCA
Sbjct: 165 NKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDTLVCILLLIDASVPPQKIDLDCA 224

Query: 251 NWLGRNNIAMTLVFTKCDKMKGGKGKRPDENIKSFQELIRQNYKIHPPWIMTSSATGLGR 72
           NWLGRNN+ MT VFTKCDKMK  KGKRPDENIK+FQ++IR+N+K+HPPWI+TSS +GLGR
Sbjct: 225 NWLGRNNVPMTFVFTKCDKMKAAKGKRPDENIKAFQQIIRENFKVHPPWILTSSVSGLGR 284

Query: 71  DDLLLHMSQLRNYWD 27
           D+LLLHMSQLRNYWD
Sbjct: 285 DELLLHMSQLRNYWD 299


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