BLASTX nr result

ID: Cnidium21_contig00034115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034115
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2...   220   1e-55
gb|ABK95529.1| unknown [Populus trichocarpa]                          220   1e-55
gb|AER26533.1| eukaryotic translation initiation factor 3G [Cari...   218   3e-55
emb|CBI31616.3| unnamed protein product [Vitis vinifera]              216   2e-54
ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...   216   2e-54

>ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  220 bits (560), Expect = 1e-55
 Identities = 110/137 (80%), Positives = 117/137 (85%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2   YKDLAPQTDAFVDKPPTSDATMH-TGTTKGTYIPPSLRAGAERPAVPDMRRRNEENSVRV 178
           YKDLA   + F+DKPP ++  M  TG TKG Y+PPS+RAGAER    DMRRRNEENSVRV
Sbjct: 158 YKDLAQPPETFIDKPPATETAMAATGATKGAYVPPSMRAGAERTVGSDMRRRNEENSVRV 217

Query: 179 TNLSEDTREADLLELFRTFGPVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAIMKLNGY 358
           TNLSEDTRE DLLELFRTFG VSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAI KLNGY
Sbjct: 218 TNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNGY 277

Query: 359 GYDSLILHVEWATPRVN 409
           GYD+LIL VEWATPR N
Sbjct: 278 GYDNLILRVEWATPRTN 294


>gb|ABK95529.1| unknown [Populus trichocarpa]
          Length = 194

 Score =  220 bits (560), Expect = 1e-55
 Identities = 110/137 (80%), Positives = 117/137 (85%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2   YKDLAPQTDAFVDKPPTSDATMH-TGTTKGTYIPPSLRAGAERPAVPDMRRRNEENSVRV 178
           YKDLA   + F+DKPP ++  M  TG TKG Y+PPS+RAGAER    DMRRRNEENSVRV
Sbjct: 58  YKDLAQPPETFIDKPPATETAMAATGATKGAYVPPSMRAGAERTVGSDMRRRNEENSVRV 117

Query: 179 TNLSEDTREADLLELFRTFGPVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAIMKLNGY 358
           TNLSEDTRE DLLELFRTFG VSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAI KLNGY
Sbjct: 118 TNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNGY 177

Query: 359 GYDSLILHVEWATPRVN 409
           GYD+LIL VEWATPR N
Sbjct: 178 GYDNLILRVEWATPRTN 194


>gb|AER26533.1| eukaryotic translation initiation factor 3G [Carica papaya]
          Length = 297

 Score =  218 bits (556), Expect = 3e-55
 Identities = 108/137 (78%), Positives = 120/137 (87%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2   YKDLAPQTDAFVDKPPTSDATMHT-GTTKGTYIPPSLRAGAERPAVPDMRRRNEENSVRV 178
           YKDLAPQT+AFVDKP  S+ +    G+ K TY+PPS+RAGAER    DMRRRN+ENSVRV
Sbjct: 161 YKDLAPQTEAFVDKPAASETSAAAAGSGKSTYVPPSMRAGAERTGGSDMRRRNDENSVRV 220

Query: 179 TNLSEDTREADLLELFRTFGPVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAIMKLNGY 358
           TNLSEDTRE DLLELFRTFGPV+RVYVAIDQKTGVSRGFGFVNFV++EDA+RAI KLNGY
Sbjct: 221 TNLSEDTREPDLLELFRTFGPVTRVYVAIDQKTGVSRGFGFVNFVNREDAQRAINKLNGY 280

Query: 359 GYDSLILHVEWATPRVN 409
           GYD+LIL VEWATPR N
Sbjct: 281 GYDNLILRVEWATPRAN 297


>emb|CBI31616.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score =  216 bits (550), Expect = 2e-54
 Identities = 110/137 (80%), Positives = 118/137 (86%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2   YKDLAPQTDAFVDKPPTSDATMHT-GTTKGTYIPPSLRAGAERPAVPDMRRRNEENSVRV 178
           YKDLA QTDAFVDKPP ++ T+ T GT K  Y+PP +R GAER    DMRRRNEENSVRV
Sbjct: 58  YKDLAAQTDAFVDKPPAAETTVATTGTGKAAYVPPGMRPGAERVG-SDMRRRNEENSVRV 116

Query: 179 TNLSEDTREADLLELFRTFGPVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAIMKLNGY 358
           TNLSEDTRE DL ELFRTFGPVSRVYVAIDQKTG+SRGFGFVNFV+KEDAERAI KLNGY
Sbjct: 117 TNLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKEDAERAINKLNGY 176

Query: 359 GYDSLILHVEWATPRVN 409
           GYD+LIL VEWATPR N
Sbjct: 177 GYDNLILRVEWATPRTN 193


>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 301

 Score =  216 bits (550), Expect = 2e-54
 Identities = 110/137 (80%), Positives = 118/137 (86%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2   YKDLAPQTDAFVDKPPTSDATMHT-GTTKGTYIPPSLRAGAERPAVPDMRRRNEENSVRV 178
           YKDLA QTDAFVDKPP ++ T+ T GT K  Y+PP +R GAER    DMRRRNEENSVRV
Sbjct: 166 YKDLAAQTDAFVDKPPAAETTVATTGTGKAAYVPPGMRPGAERVG-SDMRRRNEENSVRV 224

Query: 179 TNLSEDTREADLLELFRTFGPVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAIMKLNGY 358
           TNLSEDTRE DL ELFRTFGPVSRVYVAIDQKTG+SRGFGFVNFV+KEDAERAI KLNGY
Sbjct: 225 TNLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKEDAERAINKLNGY 284

Query: 359 GYDSLILHVEWATPRVN 409
           GYD+LIL VEWATPR N
Sbjct: 285 GYDNLILRVEWATPRTN 301


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