BLASTX nr result

ID: Cnidium21_contig00034111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034111
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   118   9e-25
emb|CBI23047.3| unnamed protein product [Vitis vinifera]              118   9e-25
gb|AFK41044.1| unknown [Lotus japonicus]                              112   5e-23
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   112   8e-23
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   109   5e-22

>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  118 bits (296), Expect = 9e-25
 Identities = 63/98 (64%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
 Frame = +1

Query: 61  VSGGSGSAVAENQSLGVECGRPENSLPLDASSTLFVEGVPLNCSLREVHHIFRIFLGYKE 240
           V G    A  ++QSLG   GRPE  LP DASSTLFVEG+P NC+ REV HIFR F+GYKE
Sbjct: 99  VRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKE 158

Query: 241 VRLVN--ASNSNGDPLVHCFVDFESPYYAANAMDCLQG 348
           VRLV+  + +S GDPLV CFVDF SP +AA AMD LQG
Sbjct: 159 VRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQG 196


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  118 bits (296), Expect = 9e-25
 Identities = 63/98 (64%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
 Frame = +1

Query: 61  VSGGSGSAVAENQSLGVECGRPENSLPLDASSTLFVEGVPLNCSLREVHHIFRIFLGYKE 240
           V G    A  ++QSLG   GRPE  LP DASSTLFVEG+P NC+ REV HIFR F+GYKE
Sbjct: 100 VRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKE 159

Query: 241 VRLVN--ASNSNGDPLVHCFVDFESPYYAANAMDCLQG 348
           VRLV+  + +S GDPLV CFVDF SP +AA AMD LQG
Sbjct: 160 VRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQG 197


>gb|AFK41044.1| unknown [Lotus japonicus]
          Length = 232

 Score =  112 bits (281), Expect = 5e-23
 Identities = 58/98 (59%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
 Frame = +1

Query: 61  VSGGSGSAVAENQSLGVECGRPENSLPLDASSTLFVEGVPLNCSLREVHHIFRIFLGYKE 240
           + G      A+ + LG+  GRP++SLP DA+STLFVEG+P NC  REV HIFR F+GYKE
Sbjct: 100 IGGVDRGPSAKEKILGLSSGRPDHSLPPDATSTLFVEGLPTNCPRREVAHIFRPFVGYKE 159

Query: 241 VRLVN--ASNSNGDPLVHCFVDFESPYYAANAMDCLQG 348
           VRLV+  +    GDPLV CFVDFESP +AA A D LQG
Sbjct: 160 VRLVSKESRQPGGDPLVLCFVDFESPAHAATAKDALQG 197


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545062|gb|EEF46575.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 232

 Score =  112 bits (279), Expect = 8e-23
 Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = +1

Query: 61  VSGGSGSAVAENQSLGVECGRPENSLPLDASSTLFVEGVPLNCSLREVHHIFRIFLGYKE 240
           + G       ++++LG+  GRPE SLP DA+STLFVEG+P +CS REV HIFR F+GYKE
Sbjct: 102 IGGLDPGPTVKDRTLGLGSGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161

Query: 241 VRLVN--ASNSNGDPLVHCFVDFESPYYAANAMDCLQG 348
           VRLV+  +    GDPLV CFVDF SP +AA AMD LQG
Sbjct: 162 VRLVSKESRRPGGDPLVLCFVDFLSPAHAATAMDALQG 199


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  109 bits (272), Expect = 5e-22
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = +1

Query: 79  SAVAENQSLGVECGRPENSLPLDASSTLFVEGVPLNCSLREVHHIFRIFLGYKEVRLVN- 255
           +   ++++LG   GRPE  LP DASSTLFVEG+P NC+ REV HIFR F+GYKEVRLV+ 
Sbjct: 109 ATTVKDRTLGYGGGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSK 168

Query: 256 -ASNSNGDPLVHCFVDFESPYYAANAMDCLQG 348
            + +  GDPLV CFVDF SP +AA AMD LQG
Sbjct: 169 ESRHPGGDPLVLCFVDFLSPAHAATAMDALQG 200


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