BLASTX nr result
ID: Cnidium21_contig00034110
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00034110 (588 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACJ03066.1| M18S-3Ap [Malus floribunda] 59 2e-12 emb|CAC40825.1| HcrVf1 protein [Malus floribunda] 55 2e-12 gb|ACG60701.1| HcrVf1-like protein [Malus x domestica] gi|195970... 55 3e-12 gb|ACG60702.1| HcrVf1-like protein [Malus x domestica] 55 6e-12 ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|2... 56 1e-11 >gb|ACJ03066.1| M18S-3Ap [Malus floribunda] Length = 1045 Score = 58.5 bits (140), Expect(2) = 2e-12 Identities = 28/59 (47%), Positives = 44/59 (74%) Frame = -2 Query: 584 NLIYLNLFYSNFEGLVPHHLGNLSNLKCFDLSYYDNSEGPQLRMDSMWWLSKLSVLEHL 408 +L +LNL YS F G++PH LGNLS+L+ +LS +S G L+++++ W+S LS+L+HL Sbjct: 148 SLTHLNLAYSEFYGIIPHKLGNLSSLRYLNLS---SSNGFNLKVENLQWISGLSLLKHL 203 Score = 38.9 bits (89), Expect(2) = 2e-12 Identities = 26/62 (41%), Positives = 33/62 (53%) Frame = -1 Query: 405 VNLSSAADWFSSINILHKSIVKLDLCGCHLPNNISCHLPFMNLTSLVSFVLYENHL*LLF 226 VNLS A+DW N+L S+V+LD+ C L + LP N TSLV L N L Sbjct: 208 VNLSKASDWLQVTNML-PSLVELDMSNCQL--HQITPLPTTNFTSLVVLDLSGNRFNSLM 264 Query: 225 PL 220 P+ Sbjct: 265 PM 266 >emb|CAC40825.1| HcrVf1 protein [Malus floribunda] Length = 1015 Score = 55.1 bits (131), Expect(2) = 2e-12 Identities = 27/59 (45%), Positives = 44/59 (74%) Frame = -2 Query: 584 NLIYLNLFYSNFEGLVPHHLGNLSNLKCFDLSYYDNSEGPQLRMDSMWWLSKLSVLEHL 408 +L +LNL +S F+G++PH+LGNLS+L+ LS + NS L+ +++ W+S LS+L+HL Sbjct: 141 SLTHLNLGFSWFDGVIPHNLGNLSSLRYLYLSSFYNS---NLKAENLQWISGLSLLKHL 196 Score = 42.0 bits (97), Expect(2) = 2e-12 Identities = 28/61 (45%), Positives = 33/61 (54%) Frame = -1 Query: 405 VNLSSAADWFSSINILHKSIVKLDLCGCHLPNNISCHLPFMNLTSLVSFVLYENHL*LLF 226 VNLS A+DW N+L S+V+LD+ GC L LP N TSLV L EN L Sbjct: 201 VNLSKASDWLQVTNML-PSLVELDMSGCQLDQ--IPPLPTPNFTSLVVLDLSENFFNSLM 257 Query: 225 P 223 P Sbjct: 258 P 258 >gb|ACG60701.1| HcrVf1-like protein [Malus x domestica] gi|195970471|gb|ACG60704.1| HcrVf1-like protein [Malus x domestica] Length = 231 Score = 55.1 bits (131), Expect(2) = 3e-12 Identities = 27/59 (45%), Positives = 44/59 (74%) Frame = -2 Query: 584 NLIYLNLFYSNFEGLVPHHLGNLSNLKCFDLSYYDNSEGPQLRMDSMWWLSKLSVLEHL 408 +L +LNL +S F+G++PH+LGNLS+L+ LS + NS L+ +++ W+S LS+L+HL Sbjct: 50 SLTHLNLGFSWFDGVIPHNLGNLSSLRYLYLSSFYNS---NLKAENLQWISGLSLLKHL 105 Score = 42.0 bits (97), Expect(2) = 3e-12 Identities = 28/61 (45%), Positives = 33/61 (54%) Frame = -1 Query: 405 VNLSSAADWFSSINILHKSIVKLDLCGCHLPNNISCHLPFMNLTSLVSFVLYENHL*LLF 226 VNLS A+DW N+L S+V+LD+ GC L LP N TSLV L EN L Sbjct: 110 VNLSKASDWLQVTNML-PSLVELDMSGCQLDQ--IPPLPTPNFTSLVVLDLSENFFNSLM 166 Query: 225 P 223 P Sbjct: 167 P 167 >gb|ACG60702.1| HcrVf1-like protein [Malus x domestica] Length = 231 Score = 55.1 bits (131), Expect(2) = 6e-12 Identities = 27/59 (45%), Positives = 44/59 (74%) Frame = -2 Query: 584 NLIYLNLFYSNFEGLVPHHLGNLSNLKCFDLSYYDNSEGPQLRMDSMWWLSKLSVLEHL 408 +L +LNL +S F+G++PH+LGNLS+L+ LS + NS L+ +++ W+S LS+L+HL Sbjct: 50 SLTHLNLGFSWFDGVIPHNLGNLSSLRYLYLSSFYNS---NLKAENLQWISGLSLLKHL 105 Score = 40.8 bits (94), Expect(2) = 6e-12 Identities = 28/61 (45%), Positives = 32/61 (52%) Frame = -1 Query: 405 VNLSSAADWFSSINILHKSIVKLDLCGCHLPNNISCHLPFMNLTSLVSFVLYENHL*LLF 226 VNLS A+DW N+L S V+LD+ GC L LP N TSLV L EN L Sbjct: 110 VNLSKASDWLQVTNMLPSS-VELDMSGCQLDQ--IPPLPTPNFTSLVVLDLSENFFNSLM 166 Query: 225 P 223 P Sbjct: 167 P 167 >ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|222864898|gb|EEF02029.1| predicted protein [Populus trichocarpa] Length = 995 Score = 55.8 bits (133), Expect(2) = 1e-11 Identities = 29/60 (48%), Positives = 40/60 (66%) Frame = -2 Query: 587 ENLIYLNLFYSNFEGLVPHHLGNLSNLKCFDLSYYDNSEGPQLRMDSMWWLSKLSVLEHL 408 +NL YLNL +++F G V HHLGNLSNL+ DLS+ L++D++ W S L L+HL Sbjct: 131 KNLKYLNLSHASFNGQVSHHLGNLSNLQYLDLSW-----NYGLKVDTLQWASTLPSLKHL 185 Score = 38.9 bits (89), Expect(2) = 1e-11 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = -1 Query: 408 GVNLSSAADWFSSINILHKSIVKLDLCGCHLPNNISCHLPFM---NLTSLVSFVLYENHL 238 G+ L+ A DW S+N+L S+V+L L C LP H+P + N TSL L N+ Sbjct: 189 GLKLTKAIDWLESVNML-PSLVELHLSSCSLP-----HIPLVLQTNFTSLTVLDLNTNYF 242 Query: 237 *LLFP 223 FP Sbjct: 243 NSSFP 247