BLASTX nr result

ID: Cnidium21_contig00034101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034101
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   171   9e-73
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   164   1e-70
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   109   2e-46
ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219...   111   2e-46
ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213...   109   8e-46

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  171 bits (432), Expect(3) = 9e-73
 Identities = 82/136 (60%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
 Frame = -2

Query: 405 EDFLPLQLGNSDLILGVQWLEKLGTVSTNWKLQTMKFQVDGRTVTLKGDPSLTHTKISLK 226
           EDFLPL LGNSD+ILGVQWLE LGTV +NWK Q M FQ+ G   TL GDP+L  +K+SLK
Sbjct: 556 EDFLPLGLGNSDVILGVQWLETLGTVVSNWKTQKMSFQLGGVPYTLTGDPTLARSKVSLK 615

Query: 225 AMLRTIRKEGGGILVELNRME-GKESTGQKGEQDAKVPELLNPVLNRFQGVFEMPPGLPP 49
           AMLRT+RKEGGG+ +E N++E G   + +  + + ++P  L  ++ RF+GVFE P GLPP
Sbjct: 616 AMLRTLRKEGGGLWLECNQVEAGGAGSIRDSKVEQEIPPFLQELMRRFEGVFETPVGLPP 675

Query: 48  KRGHEHSIVLKQGSNP 1
           +RGHEH+IVLK+GSNP
Sbjct: 676 RRGHEHAIVLKEGSNP 691



 Score =  126 bits (316), Expect(3) = 9e-73
 Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 14/131 (10%)
 Frame = -3

Query: 767 KKKEKGICFRCDDKWSIGHRCKKRELSVLLTQXXXXXXXXXXXXXENQEQQLDVKVA--- 597
           +K+ KG+CF+CD+KW +GH+C+++ELSVL  +              N+E +L+  ++   
Sbjct: 410 EKRAKGLCFKCDEKWGVGHQCRRKELSVLFMED-------------NEEDELEGALSGSE 456

Query: 596 -----------EVSLNSVVGLTSPKTMKMAGKIGDQEVIVMIDPGATHNFISLATVQKTG 450
                      EVSLNSV+GL++PKTMK++G I + EV+VMIDPGATHNF+SL  + K G
Sbjct: 457 APPSPTEEIPPEVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLG 516

Query: 449 LPVIESKEFGV 417
           +PV ES+EFGV
Sbjct: 517 IPVTESEEFGV 527



 Score = 24.6 bits (52), Expect(3) = 9e-73
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -2

Query: 792 RLTERELQQKKREGNLF 742
           RLTE+ELQ+K+ +G  F
Sbjct: 402 RLTEKELQEKRAKGLCF 418


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  164 bits (414), Expect(2) = 1e-70
 Identities = 79/137 (57%), Positives = 104/137 (75%)
 Frame = -2

Query: 411 IWEDFLPLQLGNSDLILGVQWLEKLGTVSTNWKLQTMKFQVDGRTVTLKGDPSLTHTKIS 232
           + ED+LPL LGNSDLILGVQWLEKLGT+ TNWK QT++++    TVTL+G+P+L+ T++S
Sbjct: 490 VMEDYLPLTLGNSDLILGVQWLEKLGTMVTNWKTQTLQYKEGNETVTLRGNPALSRTEVS 549

Query: 231 LKAMLRTIRKEGGGILVELNRMEGKESTGQKGEQDAKVPELLNPVLNRFQGVFEMPPGLP 52
           LKAM RT+RKEGGG LV+LN+M   E   +   +  +VP  L P+L+ +Q VF MP GLP
Sbjct: 550 LKAMYRTLRKEGGGFLVDLNQMASHEGLPR---ELPEVPSCLQPLLSSYQQVFNMPLGLP 606

Query: 51  PKRGHEHSIVLKQGSNP 1
           P RGH H+I L+ G+NP
Sbjct: 607 PDRGHVHAINLQHGTNP 623



 Score =  129 bits (324), Expect(2) = 1e-70
 Identities = 62/120 (51%), Positives = 84/120 (70%), Gaps = 4/120 (3%)
 Frame = -3

Query: 764 KKEKGICFRCDDKWSIGHRCKKRELSVLL----TQXXXXXXXXXXXXXENQEQQLDVKVA 597
           K+E G+CFRCD+KW+IGHRCKK+ELS+LL     +                + QL++   
Sbjct: 345 KREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDDSQLEIHSP 404

Query: 596 EVSLNSVVGLTSPKTMKMAGKIGDQEVIVMIDPGATHNFISLATVQKTGLPVIESKEFGV 417
           E+SLNSV+G++SPKT+KM G I  Q+VIVM+DPGATHNFISL TV++  +P+  S+ FGV
Sbjct: 405 EISLNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSRPFGV 464


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  109 bits (272), Expect(2) = 2e-46
 Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
 Frame = -2

Query: 423  WSIEIWEDFLPLQLGNSDLILGVQWLEKLGTVSTNWKLQTMKFQVDGRTVTLKGDPSLTH 244
            W +E   +FLPL+LG  D +L +QWL  LG    +WK  TM F  +G+ V +KGDPSLT 
Sbjct: 1398 WKVEA--NFLPLELGGVDGVLEMQWLYSLGVTEVDWKNLTMTFLHNGKKVKIKGDPSLTK 1455

Query: 243  TKISLKAMLRTIRKEGGGILVELNRMEGKESTGQKG--EQDAKVPELLNPVLNRFQGVFE 70
              + LK M+++ R    G L+E   ME      +    E+   V E ++ VL +F+ VF 
Sbjct: 1456 AMVGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSDVLKKFEDVFT 1515

Query: 69   MPPGLPPKRGHEHSIVLKQGSNP 1
             P  LPP+R  EH I LKQG++P
Sbjct: 1516 WPETLPPRRSIEHHIYLKQGTDP 1538



 Score =  103 bits (257), Expect(2) = 2e-46
 Identities = 56/128 (43%), Positives = 78/128 (60%), Gaps = 9/128 (7%)
 Frame = -3

Query: 773  YNKKKEKGICFRCDDKWSIGHRCK---KRELSVLLTQXXXXXXXXXXXXXENQEQQL--- 612
            +  +KEKG+CFRC++K+  GHRCK   +REL + + +             +  E      
Sbjct: 1247 FQAQKEKGLCFRCNEKYFHGHRCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEI 1306

Query: 611  ---DVKVAEVSLNSVVGLTSPKTMKMAGKIGDQEVIVMIDPGATHNFISLATVQKTGLPV 441
               D  + E+S+NSVVGLT+PKTMK+ GKI D+EVI++ID GATHNFIS   VQ+  LP 
Sbjct: 1307 NPEDQAIVELSINSVVGLTNPKTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPT 1366

Query: 440  IESKEFGV 417
              +  +GV
Sbjct: 1367 KTTSHYGV 1374


>ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219499 [Cucumis sativus]
          Length = 718

 Score =  111 bits (278), Expect(2) = 2e-46
 Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
 Frame = -2

Query: 423 WSIEIWEDFLPLQLGNSDLILGVQWLEKLGTVSTNWKLQTMKFQVDGRTVTLKGDPSLTH 244
           W +E   +FLPL+LG  D +LG+QWL  LG    +WK  TM F  +G+ V +KGDPSLT 
Sbjct: 458 WKVEA--NFLPLELGGVDGVLGMQWLYSLGVTEVDWKNLTMTFLHNGKKVKIKGDPSLTK 515

Query: 243 TKISLKAMLRTIRKEGGGILVELNRMEGKESTGQKG--EQDAKVPELLNPVLNRFQGVFE 70
             + LK M+++ +    G L+E   ME      +    E+   V E ++ VL +F+ VF 
Sbjct: 516 AMVGLKNMIKSWKDSDQGFLIECRAMETMYEPSEDNGIEEILTVDEAVSVVLKKFEDVFT 575

Query: 69  MPPGLPPKRGHEHSIVLKQGSNP 1
            P  LPP+R  EH I LKQG++P
Sbjct: 576 WPETLPPRRSIEHHIYLKQGTDP 598



 Score =  100 bits (250), Expect(2) = 2e-46
 Identities = 54/128 (42%), Positives = 77/128 (60%), Gaps = 9/128 (7%)
 Frame = -3

Query: 773 YNKKKEKGICFRCDDKWSIGHRCK---KRELSVLLTQXXXXXXXXXXXXXENQEQQL--- 612
           +  +KEKG+CFRC++K+  GHRC+   +REL + + +             +  E      
Sbjct: 307 FQARKEKGLCFRCNEKYFHGHRCRGREQRELRMYVVKEDEEYEIVEEAEWDETESNCVEI 366

Query: 611 ---DVKVAEVSLNSVVGLTSPKTMKMAGKIGDQEVIVMIDPGATHNFISLATVQKTGLPV 441
              D  + E+S+NSVVGLT+P TMK+ GKI D+EVI++ID GATHNFIS   VQ+  LP 
Sbjct: 367 NPEDQAIVELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPT 426

Query: 440 IESKEFGV 417
             +  +GV
Sbjct: 427 KTTSHYGV 434


>ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
           sativus]
          Length = 764

 Score =  109 bits (272), Expect(2) = 8e-46
 Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
 Frame = -2

Query: 423 WSIEIWEDFLPLQLGNSDLILGVQWLEKLGTVSTNWKLQTMKFQVDGRTVTLKGDPSLTH 244
           W +E   +FLPL+LG  D +LG+QWL  LG    +WK  TM F  +G+ V +KGDPSLT 
Sbjct: 485 WKVEA--NFLPLELGGVDGVLGMQWLYSLGVTEVDWKNLTMTFLHNGKKVKIKGDPSLTK 542

Query: 243 TKISLKAMLRTIRKEGGGILVELNRMEGKESTGQKG--EQDAKVPELLNPVLNRFQGVFE 70
             + LK M+++ R    G L+E   ME      +    E+   V E ++ VL +F+ VF 
Sbjct: 543 AMVGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSDVLKKFEDVFT 602

Query: 69  MPPGLPPKRGHEHSIVLKQGSNP 1
               LPP+R  EH I LKQG++P
Sbjct: 603 WSETLPPRRSIEHHIYLKQGTDP 625



 Score =  101 bits (251), Expect(2) = 8e-46
 Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 9/128 (7%)
 Frame = -3

Query: 773 YNKKKEKGICFRCDDKWSIGHRCK---KRELSVLLTQXXXXXXXXXXXXXENQEQQL--- 612
           +  +KEKG+CFRC++K+  GHRCK   +REL + + +             +  E      
Sbjct: 334 FQARKEKGLCFRCNEKYFHGHRCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEI 393

Query: 611 ---DVKVAEVSLNSVVGLTSPKTMKMAGKIGDQEVIVMIDPGATHNFISLATVQKTGLPV 441
              D  + E+S+NSVVGLT+P TMK+ GKI D+EVI++ID GATHNFIS   VQ+  LP 
Sbjct: 394 NPEDQAIVELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPT 453

Query: 440 IESKEFGV 417
             +  +GV
Sbjct: 454 KTTSHYGV 461


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