BLASTX nr result

ID: Cnidium21_contig00034055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034055
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529953.1| DNA repair protein reca, putative [Ricinus c...    82   4e-14
emb|CBI21810.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...    79   4e-13
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...    75   4e-12
ref|XP_003562020.1| PREDICTED: DNA repair protein recA homolog 1...    74   9e-12

>ref|XP_002529953.1| DNA repair protein reca, putative [Ricinus communis]
           gi|223530551|gb|EEF32430.1| DNA repair protein reca,
           putative [Ricinus communis]
          Length = 343

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 41/73 (56%), Positives = 54/73 (73%)
 Frame = -2

Query: 368 AEMMDVVLKKGSCYCYADQRLGQGRDEALQHLKENPVQSTEIEKIVRSIIIEGTKQISSF 189
           AEMMDVV+KKGS Y Y + RLGQGRD ALQ+L++NP    EIEK VRS++ +GT   +S 
Sbjct: 266 AEMMDVVVKKGSWYSYGEHRLGQGRDRALQYLRDNPHLHEEIEKKVRSMMADGTVNTASL 325

Query: 188 NTRSLPLQLQE*N 150
            +R+ PL L++ N
Sbjct: 326 YSRNSPLPLEDEN 338


>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/66 (59%), Positives = 49/66 (74%)
 Frame = -2

Query: 368 AEMMDVVLKKGSCYCYADQRLGQGRDEALQHLKENPVQSTEIEKIVRSIIIEGTKQISSF 189
           AE+MDVV+KKGS Y Y D RLGQGRD ALQ+L+ENP+   EIEKIVR ++ EG  Q+ + 
Sbjct: 306 AELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAP 365

Query: 188 NTRSLP 171
           + R  P
Sbjct: 366 HVRLSP 371


>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Vitis vinifera]
          Length = 415

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/66 (59%), Positives = 49/66 (74%)
 Frame = -2

Query: 368 AEMMDVVLKKGSCYCYADQRLGQGRDEALQHLKENPVQSTEIEKIVRSIIIEGTKQISSF 189
           AE+MDVV+KKGS Y Y D RLGQGRD ALQ+L+ENP+   EIEKIVR ++ EG  Q+ + 
Sbjct: 337 AELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAP 396

Query: 188 NTRSLP 171
           + R  P
Sbjct: 397 HVRLSP 402


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Glycine max]
          Length = 414

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = -2

Query: 368 AEMMDVVLKKGSCYCYADQRLGQGRDEALQHLKENPVQSTEIEKIVRSIIIEGTKQISSF 189
           AEM D+V KKGS Y Y D RLGQGRD+A+Q+LKEN     EIEK+VRS +I+GT Q S  
Sbjct: 337 AEMTDIVSKKGSWYSYGDHRLGQGRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPV 396

Query: 188 NTRS 177
           + ++
Sbjct: 397 HMKN 400


>ref|XP_003562020.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           isoform 3 [Brachypodium distachyon]
          Length = 335

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = -2

Query: 368 AEMMDVVLKKGSCYCYADQRLGQGRDEALQHLKENPVQSTEIEKIVRSIIIEGTKQIS-- 195
           AE+M+VV KKGS Y Y D RLGQGR++ALQ+L+E+P    EIEK+VR++I EGT+ ++  
Sbjct: 259 AELMEVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICDEIEKVVRAMIPEGTRHMTLL 318

Query: 194 SFNTRSLPLQLQE 156
           +F   S P + +E
Sbjct: 319 AFGQSSSPTEEEE 331


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