BLASTX nr result
ID: Cnidium21_contig00034011
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00034011
(786 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|2... 341 9e-92
ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi... 332 7e-89
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi... 325 7e-87
ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containi... 324 1e-86
ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containi... 324 1e-86
>ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|222857847|gb|EEE95394.1|
predicted protein [Populus trichocarpa]
Length = 703
Score = 341 bits (875), Expect = 9e-92
Identities = 159/211 (75%), Positives = 179/211 (84%)
Frame = +3
Query: 6 MPVEADAIVWGSLLAACRTHMNMDMAEVAAKKLSQLEPGNAGPKILLSNLYASKGKWAEV 185
MPVEADAIVWG+LL+ACRTH N+D+AE+AAKKL QLEP +AGP ILLSNLYAS+ +W +V
Sbjct: 493 MPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDV 552
Query: 186 ASLRKDMRSRKVSKSPGCSWIEVEKKVHMFTGGDSTSHPEHIMISXXXXXXXXXXXXAGY 365
A LRK MR+R VSKSPGCSWIEV+ KVHMFTGG S SHPEH MI AGY
Sbjct: 553 AELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGY 612
Query: 366 CPDGTFVLHDVDEEEKAHSLRHHSEKLAVAYGLLTVPVGMPIRVMKNLRVCGDCHSAIKL 545
CPDG+FV+HDVDEE+K HSLRHHSEK+AVAYGLL VPVG PIRVMKNLRVCGDCHSAIKL
Sbjct: 613 CPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKL 672
Query: 546 ISKIAKREIIVRDANRFHHFKDGLCSCNDYW 638
I+++ REII+RDANRFHHFKDGLCSC D+W
Sbjct: 673 IAQVTGREIILRDANRFHHFKDGLCSCRDFW 703
>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 332 bits (850), Expect = 7e-89
Identities = 159/212 (75%), Positives = 176/212 (83%)
Frame = +3
Query: 3 EMPVEADAIVWGSLLAACRTHMNMDMAEVAAKKLSQLEPGNAGPKILLSNLYASKGKWAE 182
+MPVEADAI+WG+LL ACRTHMNM++AEVAAKKL QLEP NAGP ILLSN+YASKG+W +
Sbjct: 492 KMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGD 551
Query: 183 VASLRKDMRSRKVSKSPGCSWIEVEKKVHMFTGGDSTSHPEHIMISXXXXXXXXXXXXAG 362
VA LR++MR +KVSKSPGCSWIEVEK+VHMFTGG ST HPE I AG
Sbjct: 552 VAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAG 611
Query: 363 YCPDGTFVLHDVDEEEKAHSLRHHSEKLAVAYGLLTVPVGMPIRVMKNLRVCGDCHSAIK 542
Y PD +FVLHDVDEEEK SL HHSE+LAVA+GLL VP GMPIRVMKNLRVCGDCHSAIK
Sbjct: 612 YYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIK 671
Query: 543 LISKIAKREIIVRDANRFHHFKDGLCSCNDYW 638
LI+KI REII+RDANRFHHFKDG CSC DYW
Sbjct: 672 LIAKITGREIILRDANRFHHFKDGFCSCRDYW 703
>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 325 bits (833), Expect = 7e-87
Identities = 152/212 (71%), Positives = 174/212 (82%)
Frame = +3
Query: 3 EMPVEADAIVWGSLLAACRTHMNMDMAEVAAKKLSQLEPGNAGPKILLSNLYASKGKWAE 182
+MP+E DAIVWG+LL ACRTHM +D+AEVA +KL+QLEP NAGP +LLSN+YA KG+W +
Sbjct: 500 KMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRD 559
Query: 183 VASLRKDMRSRKVSKSPGCSWIEVEKKVHMFTGGDSTSHPEHIMISXXXXXXXXXXXXAG 362
V LR+ +++R V+K PGCSWIEVEKKVHMFTGGDS HPE +I AG
Sbjct: 560 VEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAG 619
Query: 363 YCPDGTFVLHDVDEEEKAHSLRHHSEKLAVAYGLLTVPVGMPIRVMKNLRVCGDCHSAIK 542
YCPDG+FVLHDVDEEEK HSL +HSEKLAVAYGLL VP GMPIRVMKNLRVCGDCHSAIK
Sbjct: 620 YCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIK 679
Query: 543 LISKIAKREIIVRDANRFHHFKDGLCSCNDYW 638
LI+K+ REII+RDANRFHHFKDG CSC DYW
Sbjct: 680 LIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
>ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 324 bits (831), Expect = 1e-86
Identities = 152/212 (71%), Positives = 175/212 (82%)
Frame = +3
Query: 3 EMPVEADAIVWGSLLAACRTHMNMDMAEVAAKKLSQLEPGNAGPKILLSNLYASKGKWAE 182
+MP+EADAI+WG+LL ACRTHM +D+AEVAAKKL LEP NAGP ILLSN+YAS+G+W +
Sbjct: 574 KMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDD 633
Query: 183 VASLRKDMRSRKVSKSPGCSWIEVEKKVHMFTGGDSTSHPEHIMISXXXXXXXXXXXXAG 362
VA LR++MR R+VSK PGCSWI VEKKVH FTGGDS+ HPEH I+ AG
Sbjct: 634 VAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAG 693
Query: 363 YCPDGTFVLHDVDEEEKAHSLRHHSEKLAVAYGLLTVPVGMPIRVMKNLRVCGDCHSAIK 542
Y PD +FVLHDVDEEEK SL +HSEKLAVAYGLL +P+GMPIRVMKNLRVCGDCH+AIK
Sbjct: 694 YYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIK 753
Query: 543 LISKIAKREIIVRDANRFHHFKDGLCSCNDYW 638
LI+K+ REII+RDANRFHHFKDG CSC DYW
Sbjct: 754 LIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
>ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 324 bits (831), Expect = 1e-86
Identities = 152/212 (71%), Positives = 175/212 (82%)
Frame = +3
Query: 3 EMPVEADAIVWGSLLAACRTHMNMDMAEVAAKKLSQLEPGNAGPKILLSNLYASKGKWAE 182
+MP+EADAI+WG+LL ACRTHM +D+AEVAAKKL LEP NAGP ILLSN+YAS+G+W +
Sbjct: 574 KMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDD 633
Query: 183 VASLRKDMRSRKVSKSPGCSWIEVEKKVHMFTGGDSTSHPEHIMISXXXXXXXXXXXXAG 362
VA LR++MR R+VSK PGCSWI VEKKVH FTGGDS+ HPEH I+ AG
Sbjct: 634 VAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAG 693
Query: 363 YCPDGTFVLHDVDEEEKAHSLRHHSEKLAVAYGLLTVPVGMPIRVMKNLRVCGDCHSAIK 542
Y PD +FVLHDVDEEEK SL +HSEKLAVAYGLL +P+GMPIRVMKNLRVCGDCH+AIK
Sbjct: 694 YYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIK 753
Query: 543 LISKIAKREIIVRDANRFHHFKDGLCSCNDYW 638
LI+K+ REII+RDANRFHHFKDG CSC DYW
Sbjct: 754 LIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785