BLASTX nr result

ID: Cnidium21_contig00034006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034006
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...   142   4e-32
ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   142   4e-32
ref|XP_002301105.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]           139   3e-31
ref|NP_176125.1| glutamyl-tRNA reductase 1 [Arabidopsis thaliana...   138   4e-31

>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 552

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = +3

Query: 3   TCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPASDLCQHRFLLYNNDATQHIFEVSAGLD 182
           TCNRMEIYVVALSQHRGVKEVTEWMSKTSG+P S++CQHRFLLYNNDATQHIFEVSAGLD
Sbjct: 150 TCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLD 209

Query: 183 SLVLGEGQILA 215
           SLVLGEGQILA
Sbjct: 210 SLVLGEGQILA 220


>ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Cucumis
           sativus] gi|2495155|sp|P93111.1|HEM11_CUCSA RecName:
           Full=Glutamyl-tRNA reductase 1, chloroplastic;
           Short=GluTR; Flags: Precursor gi|1694926|dbj|BAA08910.1|
           glutamyl-tRNA reductase [Cucumis sativus]
          Length = 552

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = +3

Query: 3   TCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPASDLCQHRFLLYNNDATQHIFEVSAGLD 182
           TCNRMEIYVVALSQHRGVKEVTEWMSKTSG+P S++CQHRFLLYNNDATQHIFEVSAGLD
Sbjct: 150 TCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLD 209

Query: 183 SLVLGEGQILA 215
           SLVLGEGQILA
Sbjct: 210 SLVLGEGQILA 220


>ref|XP_002301105.1| predicted protein [Populus trichocarpa] gi|222842831|gb|EEE80378.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/71 (92%), Positives = 70/71 (98%)
 Frame = +3

Query: 3   TCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPASDLCQHRFLLYNNDATQHIFEVSAGLD 182
           TCNRMEIYVVALSQHRGVKEVTEWMSKTSGVP S++C+HRFLLYNNDATQH+FEVSAGLD
Sbjct: 68  TCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPVSEICEHRFLLYNNDATQHLFEVSAGLD 127

Query: 183 SLVLGEGQILA 215
           SLVLGEGQILA
Sbjct: 128 SLVLGEGQILA 138


>emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]
          Length = 542

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/71 (91%), Positives = 70/71 (98%)
 Frame = +3

Query: 3   TCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPASDLCQHRFLLYNNDATQHIFEVSAGLD 182
           TCNRMEIYVVALSQHRGVKEVTEWMSKTSGVP +++C+HRFLLYNNDATQH+FEVSAGLD
Sbjct: 140 TCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPVTEICKHRFLLYNNDATQHLFEVSAGLD 199

Query: 183 SLVLGEGQILA 215
           SLVLGEGQILA
Sbjct: 200 SLVLGEGQILA 210


>ref|NP_176125.1| glutamyl-tRNA reductase 1 [Arabidopsis thaliana]
           gi|20141560|sp|P42804.2|HEM11_ARATH RecName:
           Full=Glutamyl-tRNA reductase 1, chloroplastic;
           Short=GluTR; Flags: Precursor
           gi|8979944|gb|AAF82258.1|AC008051_9 Identical to
           glutamyl-tRNA reductase (hemA) from Arabidopsis thaliana
           gb|U03774 and contains a Glutaminyl-tRNA reductase
           PF|00745 domain. ESTs gb|H37325, gb|R90339, gb|AI992625,
           gb|N96248, gb|U74113 come from this gene [Arabidopsis
           thaliana] gi|18176439|gb|AAL60044.1| putative
           glutamyl-tRNA reductase [Arabidopsis thaliana]
           gi|20465535|gb|AAM20250.1| putative glutamyl-tRNA
           reductase [Arabidopsis thaliana]
           gi|332195411|gb|AEE33532.1| glutamyl-tRNA reductase 1
           [Arabidopsis thaliana]
          Length = 543

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/71 (91%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   TCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPASDLCQHRFLLYNNDATQHIFEVSAGLD 182
           TCNRMEIYV+ALSQHRGVKEVTEWMSKTSG+P S++CQHRFLLYN DATQHIFEVSAGLD
Sbjct: 143 TCNRMEIYVLALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNKDATQHIFEVSAGLD 202

Query: 183 SLVLGEGQILA 215
           SLVLGEGQILA
Sbjct: 203 SLVLGEGQILA 213


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