BLASTX nr result

ID: Cnidium21_contig00034001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034001
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing prot...   163   1e-38
emb|CBI23243.3| unnamed protein product [Vitis vinifera]              162   2e-38
ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [...   150   2e-34
ref|XP_002304908.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_002518481.1| signal transducer, putative [Ricinus communi...   143   2e-32

>ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Vitis
            vinifera]
          Length = 1018

 Score =  163 bits (413), Expect = 1e-38
 Identities = 89/169 (52%), Positives = 116/169 (68%), Gaps = 4/169 (2%)
 Frame = +3

Query: 54   KLGDEGMDTNGGHQGVVSHFVLQLEKKYAKLGKDLLKKFGWLDLERRVYSMENGLHICFP 233
            K GD  +D     Q V  ++VLQLE+KYAKLGKD+LKKFGWLDL R+V+S E+  HICFP
Sbjct: 597  KNGDLHVDVE--KQMVAVYWVLQLERKYAKLGKDILKKFGWLDLGRKVHSREDRRHICFP 654

Query: 234  VTGRFCALYDNNQHDAHTADTEPN---VVEKITAKG-FSPDVSSSSALSYLITCGATKLL 401
            VT +FC +++   HD+  A   PN   + +  T +G    D+S  +AL  L  CGATKL 
Sbjct: 655  VTEKFCTIFNEKDHDSSDAFEVPNELHLYKPSTGEGVLLNDISFVTALRLLKECGATKLA 714

Query: 402  DVVVRVKKCSSSPLKMMNDSVTLLINKQGLPAELLEQLPARWERLGDIV 548
            D VV V++  SSPLK+M+++V  LI  +GL ++LLEQLP RWERLGDIV
Sbjct: 715  DEVVEVRRTPSSPLKIMSEAVASLIKHRGLSSQLLEQLPTRWERLGDIV 763


>emb|CBI23243.3| unnamed protein product [Vitis vinifera]
          Length = 1013

 Score =  162 bits (411), Expect = 2e-38
 Identities = 85/156 (54%), Positives = 111/156 (71%), Gaps = 4/156 (2%)
 Frame = +3

Query: 93   QGVVSHFVLQLEKKYAKLGKDLLKKFGWLDLERRVYSMENGLHICFPVTGRFCALYDNNQ 272
            Q V  ++VLQLE+KYAKLGKD+LKKFGWLDL R+V+S E+  HICFPVT +FC +++   
Sbjct: 603  QMVAVYWVLQLERKYAKLGKDILKKFGWLDLGRKVHSREDRRHICFPVTEKFCTIFNEKD 662

Query: 273  HDAHTADTEPN---VVEKITAKG-FSPDVSSSSALSYLITCGATKLLDVVVRVKKCSSSP 440
            HD+  A   PN   + +  T +G    D+S  +AL  L  CGATKL D VV V++  SSP
Sbjct: 663  HDSSDAFEVPNELHLYKPSTGEGVLLNDISFVTALRLLKECGATKLADEVVEVRRTPSSP 722

Query: 441  LKMMNDSVTLLINKQGLPAELLEQLPARWERLGDIV 548
            LK+M+++V  LI  +GL ++LLEQLP RWERLGDIV
Sbjct: 723  LKIMSEAVASLIKHRGLSSQLLEQLPTRWERLGDIV 758


>ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [Medicago truncatula]
            gi|355511489|gb|AES92631.1| tRNA wybutosine-synthesizing
            protein 2/3/4 [Medicago truncatula]
          Length = 1046

 Score =  150 bits (378), Expect = 2e-34
 Identities = 83/170 (48%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
 Frame = +3

Query: 51   LKLGDEGMDTNGGHQGVVSHFVLQLEKKYAKLGKDLLKKFGWLDLERRVYSMENGLHICF 230
            L   +  +  NG  Q +  H VLQLEKKYAK GKD+LKKFGWLDL R+VYS E G+HICF
Sbjct: 622  LYFNENVLHINGQSQTIPLHCVLQLEKKYAKQGKDILKKFGWLDLGRKVYSEEGGVHICF 681

Query: 231  PVTGR-FCALYDNNQHDAHTADTEPNV--VEKITAKGFSPD-VSSSSALSYLITCGATKL 398
            PV    F   ++ +QH     D E  +   + +T  G+  + +S S AL+ L   GA  L
Sbjct: 682  PVHQELFAVFHERSQHSGDPIDRENKIPLSKPLTQAGYLLNKLSCSEALTLLHEYGAVLL 741

Query: 399  LDVVVRVKKCSSSPLKMMNDSVTLLINKQGLPAELLEQLPARWERLGDIV 548
             D VV  KK + SPLK+M++ VT LI ++GLP  LLE+LP RW+R+GDIV
Sbjct: 742  EDKVVETKKAAMSPLKVMSEGVTSLIEEKGLPTGLLEELPTRWDRIGDIV 791


>ref|XP_002304908.1| predicted protein [Populus trichocarpa] gi|222847872|gb|EEE85419.1|
            predicted protein [Populus trichocarpa]
          Length = 1031

 Score =  147 bits (371), Expect = 1e-33
 Identities = 78/149 (52%), Positives = 101/149 (67%), Gaps = 4/149 (2%)
 Frame = +3

Query: 114  VLQLEKKYAKLGKDLLKKFGWLDLERRVYSMENGLHICFPVTGRFCALY---DNNQHDAH 284
            VLQLEKKYAK+GKD+LK FGWLDL R+VY+ E+GLHICFP+T +F A++    +   D  
Sbjct: 630  VLQLEKKYAKMGKDILKNFGWLDLGRKVYTKEDGLHICFPITEKFSAMFLKKHDQDVDVF 689

Query: 285  TADTEPNVVEKITAKG-FSPDVSSSSALSYLITCGATKLLDVVVRVKKCSSSPLKMMNDS 461
                +  V +  T  G    +VS S+AL++L  CGAT L + V  V+K S SP + MN+S
Sbjct: 690  EEGNDTFVCKPFTGGGILLNEVSCSTALNFLKKCGATNLANEVGEVRKSSKSPFQTMNES 749

Query: 462  VTLLINKQGLPAELLEQLPARWERLGDIV 548
            + LLI ++ L   LLEQLP RWERLGDIV
Sbjct: 750  IALLIKQKDLAETLLEQLPNRWERLGDIV 778


>ref|XP_002518481.1| signal transducer, putative [Ricinus communis]
            gi|223542326|gb|EEF43868.1| signal transducer, putative
            [Ricinus communis]
          Length = 1050

 Score =  143 bits (361), Expect = 2e-32
 Identities = 74/152 (48%), Positives = 99/152 (65%)
 Frame = +3

Query: 93   QGVVSHFVLQLEKKYAKLGKDLLKKFGWLDLERRVYSMENGLHICFPVTGRFCALYDNNQ 272
            Q   SH++LQLEKKYAKLGKD+LKKF WLDL R+V+S ++GLH+CFP+T +F  ++   Q
Sbjct: 620  QLATSHWILQLEKKYAKLGKDMLKKFHWLDLTRKVHSQKDGLHVCFPITEKFYEVFSKRQ 679

Query: 273  HDAHTADTEPNVVEKITAKGFSPDVSSSSALSYLITCGATKLLDVVVRVKKCSSSPLKMM 452
            H     D      +         +VS S+ L+ L   GAT L D +V  ++ S SPL++M
Sbjct: 680  HKC--GDVAEGQNKNRGEMVLLNEVSCSTTLNLLKHYGATLLADEIVEARRTSKSPLQLM 737

Query: 453  NDSVTLLINKQGLPAELLEQLPARWERLGDIV 548
             ++V  LI  +GL  ELLEQLP RWERLG+IV
Sbjct: 738  KEAVASLIKHKGLSTELLEQLPTRWERLGNIV 769


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