BLASTX nr result

ID: Cnidium21_contig00033999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033999
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323241.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_004141125.1| PREDICTED: F-box protein At2g32560-like [Cuc...   120   1e-25
ref|XP_004158332.1| PREDICTED: F-box protein At2g32560-like [Cuc...   120   2e-25
ref|XP_003521127.1| PREDICTED: F-box protein At2g32560-like [Gly...   113   2e-23
ref|XP_003519507.1| PREDICTED: F-box protein At2g32560-like [Gly...   110   2e-22

>ref|XP_002323241.1| predicted protein [Populus trichocarpa] gi|222867871|gb|EEF05002.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  128 bits (322), Expect = 5e-28
 Identities = 68/135 (50%), Positives = 91/135 (67%), Gaps = 10/135 (7%)
 Frame = -1

Query: 433 MKNELRTLLL-PWILEALSLFFISWFKTRRIHVTFFQVP-----TFSSYKVKKEEIIRET 272
           MK+E + LLL PW  E  S F +SWF   R  V+ FQVP     T  +   + +EI+ E 
Sbjct: 1   MKSEGKMLLLGPWFWEGFSSFLVSWFNKGRFAVSMFQVPLKMPLTKVNLCSEVQEIVEEE 60

Query: 271 ----SLLDLPDLALDCILEKLSPPELSNVASVCTSLRNVCINDYFWEKHLKHKWGRLIGD 104
               SLLDLP+LAL+CILE+LSP EL ++A VC SLR+ C +D+ WEKHLKHKWGR+I +
Sbjct: 61  GESPSLLDLPELALECILERLSPAELCSMAGVCNSLRDRCRSDHLWEKHLKHKWGRVICE 120

Query: 103 IAYREWKSNIALKKK 59
            A +EW+ +IA +K+
Sbjct: 121 AACKEWQCHIASRKR 135


>ref|XP_004141125.1| PREDICTED: F-box protein At2g32560-like [Cucumis sativus]
          Length = 387

 Score =  120 bits (301), Expect = 1e-25
 Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 11/163 (6%)
 Frame = -1

Query: 460 ISFLNSFMEMKNELRTLLLPWILEA--LSLFFISWFKTRRIHVTFFQVPTFS-------- 311
           ISFL+  +  K+     LLPW ++   L+   +SWF   ++ ++FF V   S        
Sbjct: 6   ISFLSFILLSKSFSYKRLLPWEVKMSLLTALLVSWFHKSKLALSFFLVLKVSDPSLKSIR 65

Query: 310 -SYKVKKEEIIRETSLLDLPDLALDCILEKLSPPELSNVASVCTSLRNVCINDYFWEKHL 134
            S K+   E  R TSLLDLP+LAL+ IL++LSP EL  +A+VCT LR+VC +DYFWEKH+
Sbjct: 66  CSTKLGNLEEKRGTSLLDLPELALESILDRLSPSELCRMANVCTYLRDVCEDDYFWEKHM 125

Query: 133 KHKWGRLIGDIAYREWKSNIALKKKQALSECCSDQNGIFQLFS 5
           K KWG+L+G+ A +EW  +IA +++  L+     + G F  +S
Sbjct: 126 KQKWGKLMGNSASKEWHLHIARQRRSKLTS-SPQKKGFFSSYS 167


>ref|XP_004158332.1| PREDICTED: F-box protein At2g32560-like [Cucumis sativus]
          Length = 387

 Score =  120 bits (300), Expect = 2e-25
 Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 11/163 (6%)
 Frame = -1

Query: 460 ISFLNSFMEMKNELRTLLLPWILEA--LSLFFISWFKTRRIHVTFFQV-----PTFSSYK 302
           ISFL+  +  K+     LLPW ++   L+   +SWF   ++ ++FF V     P+  S +
Sbjct: 6   ISFLSFILLSKSFSYKRLLPWEVKMSLLTALLVSWFHKSKLALSFFLVLKVSDPSLKSIR 65

Query: 301 VKKE----EIIRETSLLDLPDLALDCILEKLSPPELSNVASVCTSLRNVCINDYFWEKHL 134
              +    E  R TSLLDLP+LAL+ IL++LSP EL  +A+VCT LR+VC +DYFWEKH+
Sbjct: 66  CNTKLGNLEEKRGTSLLDLPELALESILDRLSPSELCRMANVCTYLRDVCEDDYFWEKHM 125

Query: 133 KHKWGRLIGDIAYREWKSNIALKKKQALSECCSDQNGIFQLFS 5
           K KWG+L+G+ A +EW  +IA +++  L+     + G F  +S
Sbjct: 126 KQKWGKLMGNSASKEWHLHIARQRRSKLTS-SPQKKGFFSSYS 167


>ref|XP_003521127.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 401

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/96 (54%), Positives = 70/96 (72%)
 Frame = -1

Query: 304 KVKKEEIIRETSLLDLPDLALDCILEKLSPPELSNVASVCTSLRNVCINDYFWEKHLKHK 125
           KV+ EE     SLLDLPDL L+CILE LSP EL  VA+VCTSLR+ C +D+ W+KH++ K
Sbjct: 79  KVENEEEEGNVSLLDLPDLPLECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERK 138

Query: 124 WGRLIGDIAYREWKSNIALKKKQALSECCSDQNGIF 17
           WG++ GD AYR+WK ++A K ++ +S    +Q GIF
Sbjct: 139 WGKVFGDAAYRQWKWHVASKNREKISSNQHNQKGIF 174


>ref|XP_003519507.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 397

 Score =  110 bits (275), Expect = 2e-22
 Identities = 63/135 (46%), Positives = 85/135 (62%), Gaps = 6/135 (4%)
 Frame = -1

Query: 451 LNSFMEMKNELRTLLLPWILEALSLFFISWFKTRRIHVTFF-QVPTFSSY--KVKKEEII 281
           L S     +E+R L+ P   + LS+  IS    +R+ + F  Q+PT  S   K  K EII
Sbjct: 21  LKSLPSWASEVR-LISPLFYKDLSVKSISKLFRKRLWLGFLGQIPTRMSLVNKSSKVEII 79

Query: 280 RET---SLLDLPDLALDCILEKLSPPELSNVASVCTSLRNVCINDYFWEKHLKHKWGRLI 110
            ++   S+LDLP+L L+CILEKL PP L  +A VC SLR  C++D+ WE+H+K KWGR+I
Sbjct: 80  EDSQDMSVLDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSDHLWERHMKQKWGRVI 139

Query: 109 GDIAYREWKSNIALK 65
           G  AYREWK + A K
Sbjct: 140 GQAAYREWKWHAASK 154


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