BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033992
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25851.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...    61   8e-08
gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsu...    55   5e-06
ref|XP_003604902.1| Pentatricopeptide repeat-containing protein ...    55   8e-06

>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = +2

Query: 2   CLKGRVLDGFRLYKDIEILGXXXXXXXXXXXXXXAELIENNYLVEAEILAGLMAERDIQL 181
           CL+GRVLDGF L+ + E +                 L +  + VEA  LA LM +R IQL
Sbjct: 389 CLEGRVLDGFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGIQL 448

Query: 182 KPPYREHVVDYLKNSGKSELLSHF 253
           K PY + +V++LK SG  E+ +HF
Sbjct: 449 KTPYFDSIVEHLKESGDKEICTHF 472


>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
 Frame = +2

Query: 2   CLKGRVLDGFRLYKDIEILGXXXXXXXXXXXXXXAELIENNYLVEAEILAGLMAERDIQL 181
           CL+GRVLDGF L+ + E +                 L +  + VEA  LA LM +R IQL
Sbjct: 383 CLEGRVLDGFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGIQL 442

Query: 182 KPPYREHVVDYLKNSGKSEL---LSHFY 256
           K PY + +V++LK SG  E+   LS FY
Sbjct: 443 KTPYFDSIVEHLKESGDKEIVMYLSLFY 470


>gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227463014|gb|ACP39959.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 288

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/86 (37%), Positives = 45/86 (52%)
 Frame = +2

Query: 2   CLKGRVLDGFRLYKDIEILGXXXXXXXXXXXXXXAELIENNYLVEAEILAGLMAERDIQL 181
           C +GRVLDGF LY +IE +                 L   ++ VEA  LA LM  R I+L
Sbjct: 200 CHEGRVLDGFCLYNEIERMQYISSIDTDIYSILLVGLCRQSHSVEAVKLARLMLRRRIRL 259

Query: 182 KPPYREHVVDYLKNSGKSELLSHFYR 259
           + PY + ++ +LKNS   EL++   R
Sbjct: 260 EAPYVDEIIKHLKNSTDKELVTQLSR 285


>ref|XP_003604902.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355505957|gb|AES87099.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 449

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = +2

Query: 2   CLKGRVLDGFRLYKDIEILGXXXXXXXXXXXXXXAELIENNYLVEAEILAGLMAERDIQL 181
           CLK RVLDGF L   IE +G                L + N+L EA  LA +M ++ I L
Sbjct: 362 CLKDRVLDGFYLLDTIENMGFLSSIDSDIYSIMLIGLWQKNHLTEATKLAKIMLKKAIPL 421

Query: 182 KPPYREHVVDYLKNSGK 232
           +PPY++  +D L+  G+
Sbjct: 422 RPPYKDRAIDILRKYGE 438