BLASTX nr result

ID: Cnidium21_contig00033977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033977
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34526.1| unnamed protein product [Thellungiella halophila]     124   6e-27
ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containin...   124   8e-27
emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]   124   8e-27
ref|NP_181543.1| zinc finger CCCH domain-containing protein 29 [...   123   2e-26
gb|ADL36650.1| C3HL domain class transcription factor [Malus x d...   120   1e-25

>dbj|BAJ34526.1| unnamed protein product [Thellungiella halophila]
          Length = 600

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/118 (53%), Positives = 79/118 (66%), Gaps = 7/118 (5%)
 Frame = +3

Query: 3   GCSNSSLEVIKILLAASADINCVDVNGKRPCDVIPVDCKFTNLSKRKELEMLLGG----- 167
           GCS S +EVIKILL ASA  NC+D NG +P D++    +F     RK +E+LL G     
Sbjct: 124 GCSVSIVEVIKILLDASASPNCLDANGNKPVDLLVRASRFVPNQSRKAVEILLTGNHGSV 183

Query: 168 --FKDIDTEIPQCVEKECVSDVMLPDMNVGVYGSDEFRMYSFKVKPCSRAYTHDWTEC 335
              +D + E+   V  +  +D  LPD+N GVYG+DEFRMYSFKVKPCSRAY+HDWTEC
Sbjct: 184 SLMEDEEEEVKSVVMTKYPADASLPDINEGVYGTDEFRMYSFKVKPCSRAYSHDWTEC 241


>ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
           [Vitis vinifera]
          Length = 689

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/123 (53%), Positives = 82/123 (66%), Gaps = 12/123 (9%)
 Frame = +3

Query: 3   GCSNSSLEVIKILLAASADINCVDVNGKRPCDVIPVDCKFTNLSKRKELEMLLGGFKDID 182
           G S SSLEV+K+LL ASAD NCVD NG +P D+I    K +  S+R+  EMLL G + I+
Sbjct: 122 GGSVSSLEVVKLLLDASADANCVDCNGNKPVDMIAPALKSSCNSRRRATEMLLRGDQVIE 181

Query: 183 TEIPQ------------CVEKECVSDVMLPDMNVGVYGSDEFRMYSFKVKPCSRAYTHDW 326
            E  Q              +KE   D+ LPD+N G+YG+DEFRMY+FKVKPCSRAY+HDW
Sbjct: 182 LEEEQQPSTAPQLSKEGSEKKEYPIDISLPDINNGIYGTDEFRMYTFKVKPCSRAYSHDW 241

Query: 327 TEC 335
           TEC
Sbjct: 242 TEC 244


>emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]
          Length = 674

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/123 (53%), Positives = 82/123 (66%), Gaps = 12/123 (9%)
 Frame = +3

Query: 3   GCSNSSLEVIKILLAASADINCVDVNGKRPCDVIPVDCKFTNLSKRKELEMLLGGFKDID 182
           G S SSLEV+K+LL ASAD NCVD NG +P D+I    K +  S+R+  EMLL G + I+
Sbjct: 107 GGSVSSLEVVKLLLDASADANCVDCNGNKPVDMIAPALKSSCNSRRRATEMLLRGDQVIE 166

Query: 183 TEIPQ------------CVEKECVSDVMLPDMNVGVYGSDEFRMYSFKVKPCSRAYTHDW 326
            E  Q              +KE   D+ LPD+N G+YG+DEFRMY+FKVKPCSRAY+HDW
Sbjct: 167 LEEEQQPSTAPQLSKEGSEKKEYPIDISLPDINNGIYGTDEFRMYTFKVKPCSRAYSHDW 226

Query: 327 TEC 335
           TEC
Sbjct: 227 TEC 229


>ref|NP_181543.1| zinc finger CCCH domain-containing protein 29 [Arabidopsis
           thaliana] gi|79324795|ref|NP_001031517.1| zinc finger
           CCCH domain-containing protein 29 [Arabidopsis thaliana]
           gi|75315011|sp|Q9XEE6.1|C3H29_ARATH RecName: Full=Zinc
           finger CCCH domain-containing protein 29; Short=AtC3H29;
           AltName: Full=AtSZF2 gi|4587989|gb|AAD25930.1|AF085279_3
           hypothetical Cys-3-His zinc finger protein [Arabidopsis
           thaliana] gi|20260234|gb|AAM13015.1| putative CCCH-type
           zinc finger protein [Arabidopsis thaliana]
           gi|22136518|gb|AAM91337.1| putative CCCH-type zinc
           finger protein [Arabidopsis thaliana]
           gi|330254693|gb|AEC09787.1| zinc finger CCCH
           domain-containing protein 29 [Arabidopsis thaliana]
           gi|330254694|gb|AEC09788.1| zinc finger CCCH
           domain-containing protein 29 [Arabidopsis thaliana]
          Length = 597

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/116 (53%), Positives = 80/116 (68%), Gaps = 5/116 (4%)
 Frame = +3

Query: 3   GCSNSSLEVIKILLAASADINCVDVNGKRPCDVIPVDCKFTNLSKRKELEMLLGGF---- 170
           GCS S +E+IKILL ASA  NCVD NG +P D++  D +F     RK +E+LL G     
Sbjct: 122 GCSVSIVEIIKILLDASASPNCVDANGNKPVDLLAKDSRFVPNQSRKAVEVLLTGIHGSV 181

Query: 171 -KDIDTEIPQCVEKECVSDVMLPDMNVGVYGSDEFRMYSFKVKPCSRAYTHDWTEC 335
            ++ + E+   V K   +D  LPD+N GVYG+D+FRM+SFKVKPCSRAY+HDWTEC
Sbjct: 182 MEEEEEELKSVVTKY-PADASLPDINEGVYGTDDFRMFSFKVKPCSRAYSHDWTEC 236


>gb|ADL36650.1| C3HL domain class transcription factor [Malus x domestica]
          Length = 665

 Score =  120 bits (300), Expect = 1e-25
 Identities = 67/127 (52%), Positives = 83/127 (65%), Gaps = 16/127 (12%)
 Frame = +3

Query: 3   GCSNSSLEVIKILLAASADINCVDVNGKRPCDVIPVDCKFTNLSKRKELEMLLGGFKDI- 179
           G S +SLEV+K+LL ASAD NCV+ NG +  D+I    K    S+RK +EMLL G K I 
Sbjct: 115 GGSTASLEVVKLLLDASADANCVNANGNKAVDLIAPALKSPCSSRRKAMEMLLRGDKSIM 174

Query: 180 --DTE--------IPQCVE-----KECVSDVMLPDMNVGVYGSDEFRMYSFKVKPCSRAY 314
             DTE         PQ  +     KE   D+ LPD+N G+YG+DEFRM++FKVKPCSRAY
Sbjct: 175 ESDTEEGDQQKVSSPQMSKEGSEKKEYPIDISLPDINNGIYGTDEFRMFTFKVKPCSRAY 234

Query: 315 THDWTEC 335
           +HDWTEC
Sbjct: 235 SHDWTEC 241


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