BLASTX nr result

ID: Cnidium21_contig00033965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033965
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300573.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002267915.2| PREDICTED: regulatory protein recX-like [Vit...   122   3e-26
emb|CBI39797.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_003519641.1| PREDICTED: regulatory protein recX-like [Gly...   120   1e-25
ref|XP_002532172.1| hypothetical protein RCOM_0104450 [Ricinus c...   119   3e-25

>ref|XP_002300573.1| predicted protein [Populus trichocarpa] gi|222847831|gb|EEE85378.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/102 (57%), Positives = 79/102 (77%)
 Frame = -2

Query: 307 ITKFQIRKFLDDFQYAEAFSRSRFSSLSWGPGRIKQALRQKGVSEADAEKAIKLVFKDGE 128
           I  F+ R  ++D  YAE +SRSR+SS SWGP RIK+AL  KGVSEAD +KA+KLVF+DG+
Sbjct: 249 IGDFESRGLVNDGLYAETYSRSRWSSSSWGPRRIKKALSNKGVSEADTDKALKLVFEDGD 308

Query: 127 SGEDQSRIGLSKSSLDQLFAQASKRWLQSESQPVDKRKSKII 2
           S E +S++G+SK S+DQL  QASK+WL+ +  P D RKS++I
Sbjct: 309 SDEQESKVGMSKISMDQLLIQASKQWLRGQDVPKDTRKSRLI 350


>ref|XP_002267915.2| PREDICTED: regulatory protein recX-like [Vitis vinifera]
          Length = 301

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
 Frame = -2

Query: 307 ITKFQIRKFLDDFQYAEAFSRSRFSSLSWGPGRIKQALRQKGVSEADAEKAIKLVFK-DG 131
           I  FQ R  ++D  YAE FSRSR+SS SWGP RIKQAL +KGVSEADAEKA+KLVFK DG
Sbjct: 173 INDFQSRGLINDALYAETFSRSRWSSSSWGPRRIKQALFKKGVSEADAEKAVKLVFKDDG 232

Query: 130 ESGEDQSRIGLSKSSLDQLFAQASKRWLQSESQPVDKRKSKII 2
             G+ +SR GLS  ++D LF QASK+WL+    P + RKS+II
Sbjct: 233 SGGDQESRHGLSNLAMDHLFVQASKQWLRGHDVPRETRKSRII 275


>emb|CBI39797.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
 Frame = -2

Query: 307 ITKFQIRKFLDDFQYAEAFSRSRFSSLSWGPGRIKQALRQKGVSEADAEKAIKLVFK-DG 131
           I  FQ R  ++D  YAE FSRSR+SS SWGP RIKQAL +KGVSEADAEKA+KLVFK DG
Sbjct: 254 INDFQSRGLINDALYAETFSRSRWSSSSWGPRRIKQALFKKGVSEADAEKAVKLVFKDDG 313

Query: 130 ESGEDQSRIGLSKSSLDQLFAQASKRWLQSESQPVDKRKSKII 2
             G+ +SR GLS  ++D LF QASK+WL+    P + RKS+II
Sbjct: 314 SGGDQESRHGLSNLAMDHLFVQASKQWLRGHDVPRETRKSRII 356


>ref|XP_003519641.1| PREDICTED: regulatory protein recX-like [Glycine max]
          Length = 196

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/103 (58%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
 Frame = -2

Query: 307 ITKFQIRKFLDDFQYAEAFSRSRFSSLSWGPGRIKQALRQKGVSEADAEKAIKLVFKDGE 128
           I KFQ R F++D  YAE FS+SR++S SWGP RIKQAL +KGVS+ADAEKA+++VFKD +
Sbjct: 66  INKFQKRGFINDRLYAETFSQSRWTSSSWGPRRIKQALFKKGVSQADAEKAVEVVFKDND 125

Query: 127 SGED-QSRIGLSKSSLDQLFAQASKRWLQSESQPVDKRKSKII 2
             ED +S IGLSK S+D L+ QASK+W + ++ P + RKS+I+
Sbjct: 126 CAEDLKSVIGLSKHSMDHLYTQASKQWFRGQNVPKETRKSRIV 168


>ref|XP_002532172.1| hypothetical protein RCOM_0104450 [Ricinus communis]
           gi|223528140|gb|EEF30209.1| hypothetical protein
           RCOM_0104450 [Ricinus communis]
          Length = 364

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/102 (58%), Positives = 75/102 (73%)
 Frame = -2

Query: 307 ITKFQIRKFLDDFQYAEAFSRSRFSSLSWGPGRIKQALRQKGVSEADAEKAIKLVFKDGE 128
           I  FQ R  ++D  YAE FSRSR+SS SWGP RIKQAL  KGVSEADAEKAIKLVF+D  
Sbjct: 211 IIDFQARGLINDSLYAETFSRSRWSSSSWGPRRIKQALFMKGVSEADAEKAIKLVFEDDR 270

Query: 127 SGEDQSRIGLSKSSLDQLFAQASKRWLQSESQPVDKRKSKII 2
           SG  + ++G+SK S++ L  QASK+W + +  P + RKS+II
Sbjct: 271 SGGQELKLGMSKLSMEHLLVQASKQWFRGQDVPRETRKSRII 312


Top