BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033920
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...   244   6e-63
emb|CBI37903.3| unnamed protein product [Vitis vinifera]              241   5e-62
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   241   5e-62
ref|XP_002880355.1| pentatricopeptide repeat-containing protein ...   224   8e-57
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-56

>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score =  244 bits (623), Expect = 6e-63
 Identities = 112/176 (63%), Positives = 144/176 (81%)
 Frame = +3

Query: 6   KHPNTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLFD 185
           K PNTFL NHLINMY KCGD+  A ++FD+MS RNLYSWN M+SGY KLG + PARKLFD
Sbjct: 82  KRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFD 141

Query: 186 RMPVKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFGF 365
           +MP KDVVSWN+MVI YAKSG   + +RF+++LRR  IG+NE+SF+G+L +CVK ++   
Sbjct: 142 KMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELEL 201

Query: 366 TKQVHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEEMEVRDVMAWTTLVS 533
           +KQ H +VLV GFLSN+VI+SS++DAY  C E+G +RRLF+EM +RDV+AWTT+VS
Sbjct: 202 SKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVS 257



 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
 Frame = +3

Query: 15  NTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLFDRMP 194
           N  + + +++ Y KC +   AR+LFD+M  R++ +W  MVSGY + G V  AR+LFD MP
Sbjct: 217 NLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMP 276

Query: 195 VKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFGFTKQ 374
            K+ V+W S++ GYA+     + +  F  +   +I  ++F+FS  L            KQ
Sbjct: 277 EKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQ 336

Query: 375 VHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEEM-EVRDVMAWTTLVS 533
           +H  ++      N ++ SS++D Y  CG L   R +F+ M +  DV+ W T++S
Sbjct: 337 IHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIIS 390


>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  241 bits (615), Expect = 5e-62
 Identities = 113/176 (64%), Positives = 142/176 (80%)
 Frame = +3

Query: 6   KHPNTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLFD 185
           K P TFL NHLINMY KCG  V AR++FDKMS RNLYSWNNM+SGY KLGM+ PARKLFD
Sbjct: 91  KRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFD 150

Query: 186 RMPVKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFGF 365
           +MP KDVVSWN+MVI +A+ G + E +RF+ + R+  I  N FSF+GVLTVCVK ++ G 
Sbjct: 151 KMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGL 210

Query: 366 TKQVHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEEMEVRDVMAWTTLVS 533
           T+QVH ++LV GFLSNVV++SS++DAY  CG +G +R+LF+EM  RDV+AWTT+VS
Sbjct: 211 TRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVS 266



 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/174 (35%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
 Frame = +3

Query: 15  NTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLFDRMP 194
           N  L + +++ Y KCG    AR+LFD+MS R++ +W  MVSGY K G +  A +LF  MP
Sbjct: 226 NVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMP 285

Query: 195 VKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFGFTKQ 374
            K+ VSW +++ GYA++G   + +  F  +    +  ++F+FS  L  C         KQ
Sbjct: 286 EKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQ 345

Query: 375 VHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEEMEVR-DVMAWTTLVS 533
           +H  +L   F  N ++ S+++D Y  CG LG  R++F+ M  + DV+ W T++S
Sbjct: 346 IHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIIS 399


>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  241 bits (615), Expect = 5e-62
 Identities = 113/176 (64%), Positives = 142/176 (80%)
 Frame = +3

Query: 6   KHPNTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLFD 185
           K P TFL NHLINMY KCG  V AR++FDKMS RNLYSWNNM+SGY KLGM+ PARKLFD
Sbjct: 91  KRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFD 150

Query: 186 RMPVKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFGF 365
           +MP KDVVSWN+MVI +A+ G + E +RF+ + R+  I  N FSF+GVLTVCVK ++ G 
Sbjct: 151 KMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGL 210

Query: 366 TKQVHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEEMEVRDVMAWTTLVS 533
           T+QVH ++LV GFLSNVV++SS++DAY  CG +G +R+LF+EM  RDV+AWTT+VS
Sbjct: 211 TRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVS 266



 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/174 (35%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
 Frame = +3

Query: 15  NTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLFDRMP 194
           N  L + +++ Y KCG    AR+LFD+MS R++ +W  MVSGY K G +  A +LF  MP
Sbjct: 226 NVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMP 285

Query: 195 VKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFGFTKQ 374
            K+ VSW +++ GYA++G   + +  F  +    +  ++F+FS  L  C         KQ
Sbjct: 286 EKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQ 345

Query: 375 VHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEEMEVR-DVMAWTTLVS 533
           +H  +L   F  N ++ S+++D Y  CG LG  R++F+ M  + DV+ W T++S
Sbjct: 346 IHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIIS 399


>ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326194|gb|EFH56614.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 599

 Score =  224 bits (570), Expect = 8e-57
 Identities = 107/177 (60%), Positives = 134/177 (75%)
 Frame = +3

Query: 3   FKHPNTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLF 182
           FK PNT L NHLI MY KCG  + A ++FD+M  RNLYSWNNMVSG+VK GM+  AR +F
Sbjct: 77  FKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVF 136

Query: 183 DRMPVKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFG 362
           D MP +DVVSWN+MVIGYA+ G   E + FFK+LRRS I FNEFSF+G+LT CVKSR   
Sbjct: 137 DSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQ 196

Query: 363 FTKQVHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEEMEVRDVMAWTTLVS 533
             +Q H +VLV GFLSNVV++ SI+DAY  CG++  ++R F+EM V+D+  WTTL+S
Sbjct: 197 LNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253



 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
 Frame = +3

Query: 15  NTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLFDRMP 194
           N  L   +I+ Y KCG    A++ FD+M+ ++++ W  ++SGY KLG +  A KLF  MP
Sbjct: 213 NVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMP 272

Query: 195 VKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFGFTKQ 374
            K+ VSW +++ GY + G     +  F+ +    +   +F+FS  L            KQ
Sbjct: 273 EKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQ 332

Query: 375 VHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEE-MEVRDVMAWTTLVS 533
           +H  ++      N ++ SS++D Y   G L  S R+F    + +D + W T++S
Sbjct: 333 IHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMIS 386


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  223 bits (569), Expect = 1e-56
 Identities = 107/177 (60%), Positives = 135/177 (76%)
 Frame = +3

Query: 3   FKHPNTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLF 182
           FK P T + NHLI MY +CG  V AR++FDKMS RNLYSWN+M++GY KLG V  ARKLF
Sbjct: 93  FKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLF 152

Query: 183 DRMPVKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFG 362
           DRM  KDVVSWN++V+ YAK G F E +  ++D RR  +GFN FSF+GVL +CVK ++  
Sbjct: 153 DRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQ 212

Query: 363 FTKQVHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEEMEVRDVMAWTTLVS 533
             KQVH +VLV GFLSN+V++SSIVDAY  CGE+  +R LF+EM V+D+ AWTT+VS
Sbjct: 213 LAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVS 269



 Score =  117 bits (294), Expect = 8e-25
 Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
 Frame = +3

Query: 15  NTFLLNHLINMYCKCGDHVVARQLFDKMSERNLYSWNNMVSGYVKLGMVGPARKLFDRMP 194
           N  L + +++ Y KCG+   AR LFD+M  +++++W  +VSGY K G +  A +LF +MP
Sbjct: 229 NLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMP 288

Query: 195 VKDVVSWNSMVIGYAKSGEFGECVRFFKDLRRSSIGFNEFSFSGVLTVCVKSRDFGFTKQ 374
            K+ VSW++++ GYA++    E + +F  + +  I   +++FS  L  C         KQ
Sbjct: 289 EKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQ 348

Query: 375 VHCRVLVDGFLSNVVIASSIVDAYGTCGELGYSRRLFEEM-EVRDVMAWTTLVS 533
           VH  ++   F  N ++ SS++D Y  CG L  S  +F  M   +DV+ W T++S
Sbjct: 349 VHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMIS 402