BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033919
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85338.1| putative retrotransposon protein [Phyllostachys e...    69   4e-10
emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]         68   9e-10
gb|ABA99142.1| retrotransposon protein, putative, Ty3-gypsy subc...    67   1e-09
gb|AAM01098.1|AC098682_2 Putative retroelement [Oryza sativa Jap...    67   1e-09
gb|AAK92584.1|AC074354_18 Putative retroelement [Oryza sativa Ja...    67   1e-09

>gb|ADB85338.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1087

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
 Frame = +1

Query: 46   VEYIPREENVKADALSKFASSEIESYAGSVYFQVLKAKSIDAKLVAPINTGSC-----WI 210
            V++IPR++N  AD L++ ASS  +   G    Q+ K   +D   ++PI T S      W+
Sbjct: 990  VQFIPRKDNFLADQLARIASSRSQVLKGVFLEQLQKPSLVDTPEISPIETVSLKYEDTWM 1049

Query: 211  DPIKAHLETGWLPDNALEARKLSVRALRYALIEG 312
            DPI  +L+T ++PD+ LEA +LS +A  Y L+EG
Sbjct: 1050 DPIYKYLQTSFVPDDDLEAYRLSRKAKLYTLVEG 1083


>emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]
          Length = 1847

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 8/112 (7%)
 Frame = +1

Query: 1    LRFVKTVMTQFDECHVEYIPREENVKADALSKFASSEIESYAGSVYFQVLKAKSI--DAK 174
            L  ++++   F    VE++PR++N +ADAL+K A+     ++ S++F+VL A S+  D+ 
Sbjct: 1458 LEAIRSMEKCFTGITVEHLPRDQNEEADALAKSAACG-GPHSPSIFFEVLHAPSVPMDSS 1516

Query: 175  LVAPINTGSC------WIDPIKAHLETGWLPDNALEARKLSVRALRYALIEG 312
             V  I+          W  P   HLETGWLP +  EA++L +RA++Y ++ G
Sbjct: 1517 EVMAIDQEKLGEDPYDWRTPFVKHLETGWLPVDEAEAKRLQLRAMKYKMVSG 1568


>gb|ABA99142.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1342

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
 Frame = +1

Query: 1    LRFVKTVMTQFDECHVEYIPREENVKADALSKFASSEIESYAGSVYFQVLKAKSIDA--- 171
            L  V ++   F    VE++PR +N +ADAL+K  +       G ++F+VL A S+     
Sbjct: 1195 LEAVWSMEKYFTGITVEHLPRGQNEEADALAKSVAYGGPHLPG-IFFEVLLAPSVPVDSL 1253

Query: 172  KLVAPINTGSCWIDPIKAHLETGWLPDNALEARKLSVRALRYALIEG 312
            +++AP      W  P   HLETGWLP++  EA++L +RA +Y ++ G
Sbjct: 1254 EVMAPGEDPHDWRTPFVKHLETGWLPEDEAEAKRLQIRATKYKMVSG 1300


>gb|AAM01098.1|AC098682_2 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431128|gb|AAP52950.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1367

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = +1

Query: 1    LRFVKTVMTQFDECHVEYIPREENVKADALSKFASSEIESYAGSVYFQVLKAKSI----- 165
            L  V+++   F    VE++PR +N +ADAL+K A+ +   ++  ++F+VL A S+     
Sbjct: 1061 LEAVRSMEKCFIGIMVEHLPRGQNEEADALAKSAACD-GPHSPGIFFEVLYASSVPMDSL 1119

Query: 166  DAKLVAPINTGS--C-WIDPIKAHLETGWLPDNALEARKLSVRALRYALIEG 312
            +   +  +  G   C W  P   HLETGWLP++  EA++L +RA RY ++ G
Sbjct: 1120 EVMAIDQVKLGEDPCNWRTPFVKHLETGWLPEDEAEAKRLQLRATRYKMVSG 1171


>gb|AAK92584.1|AC074354_18 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1705

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = +1

Query: 1    LRFVKTVMTQFDECHVEYIPREENVKADALSKFASSEIESYAGSVYFQVLKAKSI----- 165
            L  V+++   F    VE++PR +N +ADAL+K A+ +   ++  ++F+VL A S+     
Sbjct: 1331 LEAVRSMEKCFIGIMVEHLPRGQNEEADALAKSAACD-GPHSPGIFFEVLYASSVPMDSL 1389

Query: 166  DAKLVAPINTGS--C-WIDPIKAHLETGWLPDNALEARKLSVRALRYALIEG 312
            +   +  +  G   C W  P   HLETGWLP++  EA++L +RA RY ++ G
Sbjct: 1390 EVMAIDQVKLGEDPCNWRTPFVKHLETGWLPEDEAEAKRLQLRATRYKMVSG 1441