BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033918
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|2...   155   6e-36
ref|XP_002511505.1| pentatricopeptide repeat-containing protein,...   149   2e-34
emb|CBI15289.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27

>ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|222868533|gb|EEF05664.1|
           predicted protein [Populus trichocarpa]
          Length = 834

 Score =  155 bits (391), Expect = 6e-36
 Identities = 81/148 (54%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
 Frame = +1

Query: 136 MLRTKQLGTLSQSAR-FFLNGSRCNAGDGNS-CTCAEDETCISRKQNTKNAVRDPQAPSS 309
           MLR KQLG LS SAR FFL+GSRC+A DG+S CTC+EDETC+S +Q  +N++   Q PS+
Sbjct: 1   MLRAKQLGNLSSSARSFFLSGSRCSATDGSSSCTCSEDETCVSTRQQPRNSILLAQKPSN 60

Query: 310 LTPKTSVKVSSFISGDVVGTPASSPQVISTPSNLGRIGTVTYASGVDCVQNDMMHPSPPM 489
              KTS +V + +SGD       S  ++   S+ G  G V+YA G+D  + D+ H SPP+
Sbjct: 61  FGSKTSARVEASVSGD------GSSFLLPQKSSCGMSGCVSYAIGIDIAEKDVGHSSPPI 114

Query: 490 SDQFVKAGIAAVSFLSDIVSYKIPTSDG 573
           SDQFV+ GIAAVSFLSD+V+YK+PTSDG
Sbjct: 115 SDQFVRVGIAAVSFLSDLVNYKLPTSDG 142


>ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550620|gb|EEF52107.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 876

 Score =  149 bits (377), Expect = 2e-34
 Identities = 81/159 (50%), Positives = 109/159 (68%), Gaps = 13/159 (8%)
 Frame = +1

Query: 136 MLRTKQLGTLSQSAR-FFLNGSRCNAGDGNSCTCAEDETCISRKQNTKNAVRDPQAPSSL 312
           MLR KQL  LS +AR FFL+GSRC+  DG+SCTC+EDE+C+ R+Q T+N     Q   +L
Sbjct: 1   MLRAKQLSNLSSNARSFFLSGSRCSTSDGSSCTCSEDESCLPRRQQTRNNAVLAQRGPAL 60

Query: 313 TPKTSVKVS-SFISGDV-----------VGTPASSPQVISTPSNLGRIGTVTYASGVDCV 456
            PK S +VS + + GD            V  P + PQV+S P ++ +   V+YASG+D V
Sbjct: 61  VPKASARVSQTSLLGDAGKLLVPHKVESVECP-TLPQVVSAPISIRKSDCVSYASGIDAV 119

Query: 457 QNDMMHPSPPMSDQFVKAGIAAVSFLSDIVSYKIPTSDG 573
           +ND+ + SPP+SDQF KAGIAAVSFLSD+V+YK+P +DG
Sbjct: 120 ENDIPYSSPPISDQFFKAGIAAVSFLSDLVNYKLPITDG 158


>emb|CBI15289.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score =  129 bits (325), Expect = 3e-28
 Identities = 75/158 (47%), Positives = 101/158 (63%), Gaps = 12/158 (7%)
 Frame = +1

Query: 136 MLRTKQLGTLSQSARFFL-NGSRCNAGDGNSCTCAEDETCISRKQNTKNAVRDPQAPSSL 312
           MLRTKQ+G LS SAR  L +G+R +  DGNSC C+EDETC+S KQ+ +N V   Q  ++L
Sbjct: 28  MLRTKQIGPLSNSARSILISGTRSSTPDGNSCPCSEDETCVSTKQHARNEVLIMQKQTTL 87

Query: 313 TPKTSVKVSSFISGD---VVGT--------PASSPQVISTPSNLGRIGTVTYASGVDCVQ 459
             KT+ +V     GD   VVG+          S  QV++ P ++     V+Y S    V 
Sbjct: 88  ASKTAARVGPLFLGDAVKVVGSQKVESVEHATSLAQVVAAPRSVVGSDCVSYVSDNVGVN 147

Query: 460 NDMMHPSPPMSDQFVKAGIAAVSFLSDIVSYKIPTSDG 573
           ND +H +PP+SDQF++AGI AV+FLSD+V+YKIP SDG
Sbjct: 148 NDAVH-APPISDQFIRAGIVAVNFLSDLVNYKIPMSDG 184


>ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
           [Vitis vinifera]
          Length = 875

 Score =  129 bits (325), Expect = 3e-28
 Identities = 75/158 (47%), Positives = 101/158 (63%), Gaps = 12/158 (7%)
 Frame = +1

Query: 136 MLRTKQLGTLSQSARFFL-NGSRCNAGDGNSCTCAEDETCISRKQNTKNAVRDPQAPSSL 312
           MLRTKQ+G LS SAR  L +G+R +  DGNSC C+EDETC+S KQ+ +N V   Q  ++L
Sbjct: 1   MLRTKQIGPLSNSARSILISGTRSSTPDGNSCPCSEDETCVSTKQHARNEVLIMQKQTTL 60

Query: 313 TPKTSVKVSSFISGD---VVGT--------PASSPQVISTPSNLGRIGTVTYASGVDCVQ 459
             KT+ +V     GD   VVG+          S  QV++ P ++     V+Y S    V 
Sbjct: 61  ASKTAARVGPLFLGDAVKVVGSQKVESVEHATSLAQVVAAPRSVVGSDCVSYVSDNVGVN 120

Query: 460 NDMMHPSPPMSDQFVKAGIAAVSFLSDIVSYKIPTSDG 573
           ND +H +PP+SDQF++AGI AV+FLSD+V+YKIP SDG
Sbjct: 121 NDAVH-APPISDQFIRAGIVAVNFLSDLVNYKIPMSDG 157


>ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74750-like [Glycine max]
          Length = 873

 Score =  126 bits (317), Expect = 2e-27
 Identities = 74/159 (46%), Positives = 96/159 (60%), Gaps = 13/159 (8%)
 Frame = +1

Query: 136 MLRTKQLGTLSQSARFFL-NGSRCNAGDGNSCTCAEDETCISRKQNTKNAVRDPQAPSSL 312
           MLR KQ+  LS SAR FL  GSRCNA DG+SC+C EDE C+SR+Q+ KN V   Q PSSL
Sbjct: 1   MLRAKQITALSSSARTFLIGGSRCNAADGSSCSCTEDEICVSRRQHIKNHVLPAQKPSSL 60

Query: 313 TPKTSVKV-SSFISGDVVGTPASS-----------PQVISTPSNLGRIGTVTYASGVDCV 456
             K + +V  + +S + V  PA              Q+ S  S   +  +VTYA  +D V
Sbjct: 61  ASKATSEVDETLVSENSVNGPACCKAKGVDQSSCIQQIRSASSPACKSDSVTYACDIDGV 120

Query: 457 QNDMMHPSPPMSDQFVKAGIAAVSFLSDIVSYKIPTSDG 573
           Q  + H SP  SDQF +A IAA++FLSD+ +YK P S+G
Sbjct: 121 QEHVEHLSPLNSDQFYRASIAAINFLSDLANYKFPLSNG 159