BLASTX nr result

ID: Cnidium21_contig00033909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033909
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ82053.1| verticillium wilt disease resistance protein prec...    84   9e-15
ref|XP_002323001.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|NP_001234474.1| verticillium wilt disease resistance protein...    77   2e-12
gb|ACR33109.1| verticillium wilt disease resistance protein [Sol...    77   2e-12
gb|ACR33107.1| verticillium wilt disease resistance protein [Sol...    77   2e-12

>gb|AAQ82053.1| verticillium wilt disease resistance protein precursor [Solanum
           torvum]
          Length = 1138

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/106 (44%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = -3

Query: 312 MKITHFSWXXXXXXXXXXXXXXL--ASGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQ 139
           M+  HF W              +   S QC              L +DSSLSTKL +WNQ
Sbjct: 1   MRFLHFLWLFLIPFFQILSGIEIFLVSSQCLDHQKSLLLKLNGTLQYDSSLSTKLARWNQ 60

Query: 138 TTKDCCNWRGVTCNKASGHVIGLDLNNEGITSEINTSSTLFRLQFL 1
            T +CCNW GVTC+  SGHVI L+L+NE I+S I  SS LF LQ+L
Sbjct: 61  NTSECCNWDGVTCD-LSGHVIALELDNETISSGIENSSALFSLQYL 105


>ref|XP_002323001.1| predicted protein [Populus trichocarpa] gi|222867631|gb|EEF04762.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/80 (50%), Positives = 51/80 (63%)
 Frame = -3

Query: 240 SGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQTTKDCCNWRGVTCNKASGHVIGLDLN 61
           SGQC              L FD S+S KLV+WN +T DCC+W G+TC++ SG VI LDL+
Sbjct: 22  SGQCRKDQQSLLLQLKNTLVFDQSVSAKLVKWN-STPDCCDWPGITCDEGSGRVISLDLS 80

Query: 60  NEGITSEINTSSTLFRLQFL 1
           +E IT  +  SS L+RLQFL
Sbjct: 81  SERITGGLGDSSGLYRLQFL 100


>ref|NP_001234474.1| verticillium wilt disease resistance protein precursor [Solanum
           lycopersicum] gi|283764862|gb|AAK58681.2|AF272366_1
           verticillium wilt disease resistance protein [Solanum
           lycopersicum]
          Length = 406

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/80 (48%), Positives = 48/80 (60%)
 Frame = -3

Query: 240 SGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQTTKDCCNWRGVTCNKASGHVIGLDLN 61
           S QC              L +DS+LS KL +WN  T +CCNW GVTCN   GHVI L+L+
Sbjct: 30  SSQCLDDQKSLLLQFKGSLQYDSTLSKKLAKWNDMTSECCNWNGVTCN-LFGHVIALELD 88

Query: 60  NEGITSEINTSSTLFRLQFL 1
           +E I+S I  SS LF LQ+L
Sbjct: 89  DETISSGIENSSALFSLQYL 108


>gb|ACR33109.1| verticillium wilt disease resistance protein [Solanum lycopersicum]
          Length = 1139

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/80 (46%), Positives = 48/80 (60%)
 Frame = -3

Query: 240 SGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQTTKDCCNWRGVTCNKASGHVIGLDLN 61
           S QC                +DS+LS KL +WN  T +CCNW GVTC+  SGHVI L+L+
Sbjct: 28  SSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCD-LSGHVIALELD 86

Query: 60  NEGITSEINTSSTLFRLQFL 1
           +E I+S I  +S LF LQ+L
Sbjct: 87  DEKISSGIENASALFSLQYL 106


>gb|ACR33107.1| verticillium wilt disease resistance protein [Solanum lycopersicum]
          Length = 1139

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/80 (46%), Positives = 48/80 (60%)
 Frame = -3

Query: 240 SGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQTTKDCCNWRGVTCNKASGHVIGLDLN 61
           S QC                +DS+LS KL +WN  T +CCNW GVTC+  SGHVI L+L+
Sbjct: 28  SSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCD-LSGHVIALELD 86

Query: 60  NEGITSEINTSSTLFRLQFL 1
           +E I+S I  +S LF LQ+L
Sbjct: 87  DEKISSGIENASALFSLQYL 106


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