BLASTX nr result
ID: Cnidium21_contig00033909
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00033909 (404 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAQ82053.1| verticillium wilt disease resistance protein prec... 84 9e-15 ref|XP_002323001.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 ref|NP_001234474.1| verticillium wilt disease resistance protein... 77 2e-12 gb|ACR33109.1| verticillium wilt disease resistance protein [Sol... 77 2e-12 gb|ACR33107.1| verticillium wilt disease resistance protein [Sol... 77 2e-12 >gb|AAQ82053.1| verticillium wilt disease resistance protein precursor [Solanum torvum] Length = 1138 Score = 84.3 bits (207), Expect = 9e-15 Identities = 47/106 (44%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = -3 Query: 312 MKITHFSWXXXXXXXXXXXXXXL--ASGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQ 139 M+ HF W + S QC L +DSSLSTKL +WNQ Sbjct: 1 MRFLHFLWLFLIPFFQILSGIEIFLVSSQCLDHQKSLLLKLNGTLQYDSSLSTKLARWNQ 60 Query: 138 TTKDCCNWRGVTCNKASGHVIGLDLNNEGITSEINTSSTLFRLQFL 1 T +CCNW GVTC+ SGHVI L+L+NE I+S I SS LF LQ+L Sbjct: 61 NTSECCNWDGVTCD-LSGHVIALELDNETISSGIENSSALFSLQYL 105 >ref|XP_002323001.1| predicted protein [Populus trichocarpa] gi|222867631|gb|EEF04762.1| predicted protein [Populus trichocarpa] Length = 1032 Score = 79.7 bits (195), Expect = 2e-13 Identities = 40/80 (50%), Positives = 51/80 (63%) Frame = -3 Query: 240 SGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQTTKDCCNWRGVTCNKASGHVIGLDLN 61 SGQC L FD S+S KLV+WN +T DCC+W G+TC++ SG VI LDL+ Sbjct: 22 SGQCRKDQQSLLLQLKNTLVFDQSVSAKLVKWN-STPDCCDWPGITCDEGSGRVISLDLS 80 Query: 60 NEGITSEINTSSTLFRLQFL 1 +E IT + SS L+RLQFL Sbjct: 81 SERITGGLGDSSGLYRLQFL 100 >ref|NP_001234474.1| verticillium wilt disease resistance protein precursor [Solanum lycopersicum] gi|283764862|gb|AAK58681.2|AF272366_1 verticillium wilt disease resistance protein [Solanum lycopersicum] Length = 406 Score = 76.6 bits (187), Expect = 2e-12 Identities = 39/80 (48%), Positives = 48/80 (60%) Frame = -3 Query: 240 SGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQTTKDCCNWRGVTCNKASGHVIGLDLN 61 S QC L +DS+LS KL +WN T +CCNW GVTCN GHVI L+L+ Sbjct: 30 SSQCLDDQKSLLLQFKGSLQYDSTLSKKLAKWNDMTSECCNWNGVTCN-LFGHVIALELD 88 Query: 60 NEGITSEINTSSTLFRLQFL 1 +E I+S I SS LF LQ+L Sbjct: 89 DETISSGIENSSALFSLQYL 108 >gb|ACR33109.1| verticillium wilt disease resistance protein [Solanum lycopersicum] Length = 1139 Score = 76.6 bits (187), Expect = 2e-12 Identities = 37/80 (46%), Positives = 48/80 (60%) Frame = -3 Query: 240 SGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQTTKDCCNWRGVTCNKASGHVIGLDLN 61 S QC +DS+LS KL +WN T +CCNW GVTC+ SGHVI L+L+ Sbjct: 28 SSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCD-LSGHVIALELD 86 Query: 60 NEGITSEINTSSTLFRLQFL 1 +E I+S I +S LF LQ+L Sbjct: 87 DEKISSGIENASALFSLQYL 106 >gb|ACR33107.1| verticillium wilt disease resistance protein [Solanum lycopersicum] Length = 1139 Score = 76.6 bits (187), Expect = 2e-12 Identities = 37/80 (46%), Positives = 48/80 (60%) Frame = -3 Query: 240 SGQCXXXXXXXXXXXXXXLTFDSSLSTKLVQWNQTTKDCCNWRGVTCNKASGHVIGLDLN 61 S QC +DS+LS KL +WN T +CCNW GVTC+ SGHVI L+L+ Sbjct: 28 SSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWNHNTSECCNWNGVTCD-LSGHVIALELD 86 Query: 60 NEGITSEINTSSTLFRLQFL 1 +E I+S I +S LF LQ+L Sbjct: 87 DEKISSGIENASALFSLQYL 106