BLASTX nr result

ID: Cnidium21_contig00033888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033888
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ...    94   1e-17
ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putativ...    93   2e-17
ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ...    91   7e-17
ref|XP_004168115.1| PREDICTED: probable cyclic nucleotide-gated ...    84   1e-14

>ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|222866563|gb|EEF03694.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/49 (89%), Positives = 48/49 (97%)
 Frame = -1

Query: 354 GGSYSLGATFLASRFAANALRGVHRNRNLKSARELVKLQKPPEPDFTAD 208
           GGSYS+GATFLA+RFAANALRG+HRNRN K+ARELVKLQKPPEPDFTAD
Sbjct: 682 GGSYSIGATFLATRFAANALRGIHRNRNAKTARELVKLQKPPEPDFTAD 730


>ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5-like
           [Glycine max]
          Length = 732

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/49 (93%), Positives = 46/49 (93%)
 Frame = -1

Query: 354 GGSYSLGATFLASRFAANALRGVHRNRNLKSARELVKLQKPPEPDFTAD 208
           G SYSLGATFLASRFAANALRGVHRNR  KSARELVKLQKPPEPDFTAD
Sbjct: 681 GSSYSLGATFLASRFAANALRGVHRNREAKSARELVKLQKPPEPDFTAD 729


>ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223531133|gb|EEF32981.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 735

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/52 (88%), Positives = 50/52 (96%), Gaps = 1/52 (1%)
 Frame = -1

Query: 354 GGSYSLGATFLASRFAANALRGVHRNRNLKSARELVKLQKPPEPDFTA-DAD 202
           GGSYS+GATFLA+RFAANALRGVHRNRN K+ARELVKLQKPPEPDF+A DAD
Sbjct: 684 GGSYSIGATFLATRFAANALRGVHRNRNAKTARELVKLQKPPEPDFSAEDAD 735


>ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5 [Vitis
           vinifera] gi|297743648|emb|CBI36531.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/49 (91%), Positives = 46/49 (93%)
 Frame = -1

Query: 354 GGSYSLGATFLASRFAANALRGVHRNRNLKSARELVKLQKPPEPDFTAD 208
           GGSYSLGAT LASRFAANALRGVHRNR  KSARELVKLQKPPEPDF+AD
Sbjct: 692 GGSYSLGATILASRFAANALRGVHRNRITKSARELVKLQKPPEPDFSAD 740


>ref|XP_004168115.1| PREDICTED: probable cyclic nucleotide-gated ion channel 6-like,
           partial [Cucumis sativus]
          Length = 711

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = -1

Query: 354 GGSYSLGATFLASRFAANALRGVHRNRNLKSARELVKLQKPPEPDFTAD 208
           GGSYS+ ATFLAS+FAANALRGV R RN KSA+EL+KLQKPPEPDF+AD
Sbjct: 660 GGSYSIRATFLASKFAANALRGVQRYRNAKSAQELIKLQKPPEPDFSAD 708


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