BLASTX nr result

ID: Cnidium21_contig00033887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033887
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521107.1| catalytic, putative [Ricinus communis] gi|22...    77   1e-12
ref|XP_002267331.2| PREDICTED: uncharacterized protein LOC100267...    64   2e-08
ref|XP_003604998.1| NHL repeat-containing protein [Medicago trun...    62   5e-08

>ref|XP_002521107.1| catalytic, putative [Ricinus communis] gi|223539676|gb|EEF41258.1|
           catalytic, putative [Ricinus communis]
          Length = 767

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
 Frame = +2

Query: 62  RRFRQISRCLPYYFPGYFYGLSRRNNGLRALHYSFPSVLCPHNDDFAKENYI------YS 223
           +RFRQIS+ LP   PG      R+     ++H +F ++  P++D     N +      YS
Sbjct: 6   QRFRQISKLLPRILPGNQLHKCRKAT---SIHSAFSTISVPNSDYDGMRNTLILHRGFYS 62

Query: 224 QRFSTVSRKKHKSLDS--DGLLSFIASNLDKVEGPSHYWLNKYED-NKAIPRKDGVFLVL 394
           QR+ST+S   H+S     D +LSFI S  ++++GP+H WLNK +  +K    KDG+FL++
Sbjct: 63  QRYSTISEVSHESNSPPVDDVLSFIKSTFNELQGPNHCWLNKVDHRDKDCLNKDGIFLLI 122

Query: 395 AG 400
           AG
Sbjct: 123 AG 124


>ref|XP_002267331.2| PREDICTED: uncharacterized protein LOC100267131 [Vitis vinifera]
          Length = 705

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/58 (50%), Positives = 39/58 (67%)
 Frame = +2

Query: 227 RFSTVSRKKHKSLDSDGLLSFIASNLDKVEGPSHYWLNKYEDNKAIPRKDGVFLVLAG 400
           RFST+S   H+S     +L +I S  D +EGPSH WLNK E++K   ++D +FLVLAG
Sbjct: 6   RFSTISELSHESCPEVEILPYIESAFDSLEGPSHCWLNKVEESKNFSKRDRIFLVLAG 63


>ref|XP_003604998.1| NHL repeat-containing protein [Medicago truncatula]
           gi|355506053|gb|AES87195.1| NHL repeat-containing
           protein [Medicago truncatula]
          Length = 784

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
 Frame = +2

Query: 50  ALQLRRFRQISRCLPYYFPGYFYGLSRRNNGLRALHYSFPSVLCPHNDDFAKENYIYSQR 229
           +L+ RR +QISR L  Y+ G  +   + + GL +L +S   +    ND   +  + +  R
Sbjct: 6   SLRFRRVKQISRLL--YYSGDCFK-HQCDKGLNSLPFSPKPIF---NDGLVRGFHFHQHR 59

Query: 230 FSTVSRKKHKSLDSDGLLSFIASNLDKVEGPSHYWLN---KYEDNKAIPRKDGVFLVLA 397
           FST     HK      LLSFI S+LD +EG  HYWLN   K E+   I    G FLVLA
Sbjct: 60  FSTSVDVLHKHAPEVDLLSFIKSSLDTLEGTDHYWLNRSVKNEEFFGIHGIHGTFLVLA 118


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