BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033885
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]   218   4e-55
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...   204   5e-51
ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|2...   201   4e-50
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...   200   9e-50
ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48

>emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]
          Length = 490

 Score =  218 bits (555), Expect = 4e-55
 Identities = 105/160 (65%), Positives = 133/160 (83%), Gaps = 2/160 (1%)
 Frame = +1

Query: 1   RPGGDSEAMSFLVDKLSDTKLTVKDWKFGRMMKQSELLFTEVQLVKILGMLGDRGQWSHA 180
           R GGD++A+ FLVD+L+   +T++DWKF R+MKQS L FTE QL++I+  LG RG W HA
Sbjct: 155 RRGGDADAIRFLVDRLTAADITIRDWKFSRVMKQSGLQFTERQLLRIVEELGARGHWKHA 214

Query: 181 LSVVEWVYNSKD--HKQYKNRYVYTKLLAVLGKARRPDDALQIFNLMCGDYHIYPDMAAY 354
           LSVVEWVY  KD  +++YK+R+VYTKLLAVLGKA+RP +AL IFNLM GD HIYPDMAAY
Sbjct: 215 LSVVEWVYTDKDKDNRRYKSRFVYTKLLAVLGKAKRPHEALDIFNLMRGDCHIYPDMAAY 274

Query: 355 HSIAVTLGQAGYLKELVSIVERMKQKPSRKIKNVRWKNWD 474
           HS+AVTLGQAG LKEL++I+E M+QKP ++IKN+  KNW+
Sbjct: 275 HSVAVTLGQAGLLKELLNIIECMRQKPPKRIKNMCRKNWN 314


>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Cucumis sativus]
           gi|449499902|ref|XP_004160949.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Cucumis sativus]
          Length = 860

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/159 (62%), Positives = 123/159 (77%)
 Frame = +1

Query: 1   RPGGDSEAMSFLVDKLSDTKLTVKDWKFGRMMKQSELLFTEVQLVKILGMLGDRGQWSHA 180
           R  GD E + FLVD+LS   ++++DWKF RMM +S L F E QL+KIL  LG +G W  A
Sbjct: 179 RRRGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQA 238

Query: 181 LSVVEWVYNSKDHKQYKNRYVYTKLLAVLGKARRPDDALQIFNLMCGDYHIYPDMAAYHS 360
           LSVVEWVYN K H   K+R+VYTKLLAVLG AR+P +ALQIFNLM GD  IYPDMAAYHS
Sbjct: 239 LSVVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHS 298

Query: 361 IAVTLGQAGYLKELVSIVERMKQKPSRKIKNVRWKNWDP 477
           IAVTLGQAG LK+L+ ++E M+Q+PS+K++N   K+WDP
Sbjct: 299 IAVTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDP 337


>ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|222853797|gb|EEE91344.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  201 bits (512), Expect = 4e-50
 Identities = 97/157 (61%), Positives = 125/157 (79%)
 Frame = +1

Query: 10  GDSEAMSFLVDKLSDTKLTVKDWKFGRMMKQSELLFTEVQLVKILGMLGDRGQWSHALSV 189
           G+ EA+ FLVD+LS  +++VKDWK  ++MKQS L F+E QL+KI+  LG++G+WS A++V
Sbjct: 77  GEGEAIRFLVDRLSCREVSVKDWKLAKIMKQSGLRFSEGQLLKIVEELGNKGKWSQAMAV 136

Query: 190 VEWVYNSKDHKQYKNRYVYTKLLAVLGKARRPDDALQIFNLMCGDYHIYPDMAAYHSIAV 369
           VEWVYN K+ +  K+R+VYTKLL+VLGK RR  +AL IFNLM  D  IYPDMAAYHSIAV
Sbjct: 137 VEWVYNDKERRDCKSRFVYTKLLSVLGKERRAQEALSIFNLMREDRRIYPDMAAYHSIAV 196

Query: 370 TLGQAGYLKELVSIVERMKQKPSRKIKNVRWKNWDPV 480
           TLGQ G LKELV ++E M+QKPS++I  +  KNWDPV
Sbjct: 197 TLGQTGLLKELVKVIECMRQKPSKRINKMLNKNWDPV 233


>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509586|gb|AES90728.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 877

 Score =  200 bits (509), Expect = 9e-50
 Identities = 98/153 (64%), Positives = 123/153 (80%)
 Frame = +1

Query: 19  EAMSFLVDKLSDTKLTVKDWKFGRMMKQSELLFTEVQLVKILGMLGDRGQWSHALSVVEW 198
           + + FLVD+L D ++  KDWKF R+MK S L FTE QL+ I+ MLG +  W  ALSVV+W
Sbjct: 189 QVVRFLVDRLCDKEIRAKDWKFSRLMKLSGLSFTEGQLMMIIEMLGVKRCWKQALSVVQW 248

Query: 199 VYNSKDHKQYKNRYVYTKLLAVLGKARRPDDALQIFNLMCGDYHIYPDMAAYHSIAVTLG 378
           VYNSKDH+++++R+VYTKLLAVLGKARRP +ALQIFN+M G+  +YPDMAAYHSIAVTLG
Sbjct: 249 VYNSKDHRKFQSRFVYTKLLAVLGKARRPKEALQIFNMMLGNIRVYPDMAAYHSIAVTLG 308

Query: 379 QAGYLKELVSIVERMKQKPSRKIKNVRWKNWDP 477
           QAG LKEL++IVE M+QKP   +K +  KNWDP
Sbjct: 309 QAGLLKELLNIVECMRQKP-ETLKYMYRKNWDP 340


>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Glycine max]
          Length = 865

 Score =  196 bits (497), Expect = 2e-48
 Identities = 96/154 (62%), Positives = 123/154 (79%)
 Frame = +1

Query: 19  EAMSFLVDKLSDTKLTVKDWKFGRMMKQSELLFTEVQLVKILGMLGDRGQWSHALSVVEW 198
           E + FLV +LSD ++T+KDWKF RMMK S L FTE QL++I+ +LG +  W  ALSVV+W
Sbjct: 169 EVIRFLVHRLSDKEITMKDWKFSRMMKMSGLPFTEGQLLRIVELLGFKRCWKQALSVVQW 228

Query: 199 VYNSKDHKQYKNRYVYTKLLAVLGKARRPDDALQIFNLMCGDYHIYPDMAAYHSIAVTLG 378
           VYN KDH+++++R+VYTKLL+VLGKA RP++ALQIFN+M    HIYPD+AAYHS+AVTLG
Sbjct: 229 VYNYKDHRKFQSRFVYTKLLSVLGKAGRPNEALQIFNMMRESIHIYPDIAAYHSVAVTLG 288

Query: 379 QAGYLKELVSIVERMKQKPSRKIKNVRWKNWDPV 480
           QAG LKEL++IVE M+QKP   +     KNWDPV
Sbjct: 289 QAGLLKELLNIVECMRQKPKAFMHR---KNWDPV 319