BLASTX nr result

ID: Cnidium21_contig00033865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033865
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   206   4e-51
ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...   199   3e-49
ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm...   194   2e-47
ref|XP_002871294.1| mitochondrial transcription termination fact...   186   5e-45
emb|CAN68940.1| hypothetical protein VITISV_028995 [Vitis vinifera]   186   5e-45

>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  206 bits (523), Expect = 4e-51
 Identities = 98/223 (43%), Positives = 147/223 (65%), Gaps = 1/223 (0%)
 Frame = -2

Query: 667 RYKSFVSIFESYGFTETQVSSLFSKRPILLQFDKNEKIKPKLEFFTKNGFSSSDLCHILA 488
           R  S +++  ++GF+ TQ+SSL  KRP LL  +    + PKL+FF   G S   L   L+
Sbjct: 92  RPDSVLALLRNHGFSRTQISSLVKKRPFLLLSNPTNTLLPKLDFFLSLGMSRPHLARTLS 151

Query: 487 LDPEIIRRNMKDLIIPSYEFLKSVLKDDASVVSVIRRCTWLLKQDFGKNLRPNVELLRNY 308
            DP ++ R++++ I+PSY FLK++L+ D  +VS  +R TW+  +D  KNL PN+ELLR  
Sbjct: 152 SDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKV 211

Query: 307 GVPDDRIAVILKLHPRAMLQSADGFKMVVEEVKEMGFDPAKSHFITACKVKCG-LSKTMW 131
           GVP   I+++L   P AM+++ + F   VEEV++MGFDP KS F+ A    CG  +K++W
Sbjct: 212 GVPQSCISLLLTHFPEAMMENHEEFSENVEEVRKMGFDPNKSTFVLAVHALCGKCNKSIW 271

Query: 130 ERKWDCFKKWGWSDDEILSAFMKQPNVMAFSEKKVDRVMDFLV 2
           ER ++ +K+WGW+ D+ILSAF K P+ M  SEKK+ + +DF V
Sbjct: 272 ERCFEVYKRWGWTKDDILSAFRKHPHCMMLSEKKIMKGLDFFV 314


>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score =  199 bits (507), Expect = 3e-49
 Identities = 101/224 (45%), Positives = 143/224 (63%), Gaps = 1/224 (0%)
 Frame = -2

Query: 670 RRYKSFVSIFESYGFTETQVSSLFSKRPILLQFDKNEKIKPKLEFFTKNGFSSSDLCHIL 491
           +R  + +++ +  GFT+TQ+SSL  KRP LL    +  + PKLEFF   G SSSDL   L
Sbjct: 67  KRADTVLALLKDRGFTKTQISSLVKKRPSLLLAHAHNTLLPKLEFFYSIGVSSSDLARTL 126

Query: 490 ALDPEIIRRNMKDLIIPSYEFLKSVLKDDASVVSVIRRCTWLLKQDFGKNLRPNVELLRN 311
           + DP ++ R++++ I+PSY FLKS+L  +  +VS ++R TW+  +D+ KNL PNVE LR 
Sbjct: 127 SSDPTLLTRSIENQIVPSYNFLKSILLSNEKIVSALKRTTWIFLEDYSKNLMPNVERLRE 186

Query: 310 YGVPDDRIAVILKLHPRAMLQSADGFKMVVEEVKEMGFDPAKSHFITACKVKCGLS-KTM 134
            GV    I+++L   P A+LQ    F  VV+EVKEMGFDP KS F+ A     G S K +
Sbjct: 187 IGVTHSCISLLLTNFPEAVLQRHGEFNKVVKEVKEMGFDPKKSIFVMAVHAISGKSNKAI 246

Query: 133 WERKWDCFKKWGWSDDEILSAFMKQPNVMAFSEKKVDRVMDFLV 2
           W + ++ +K+W WS D+I +AF K P+ M  SEKK+   MDF V
Sbjct: 247 WNKCFEVYKRWDWSKDDIFAAFKKHPHCMMLSEKKIMLAMDFFV 290


>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
           gi|223540049|gb|EEF41626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score =  194 bits (492), Expect = 2e-47
 Identities = 96/224 (42%), Positives = 142/224 (63%), Gaps = 1/224 (0%)
 Frame = -2

Query: 670 RRYKSFVSIFESYGFTETQVSSLFSKRPILLQFDKNEKIKPKLEFFTKNGFSSSDLCHIL 491
           +R  + +++    GF++TQ+SSL  KRP LL       + PKLEFF   G S+S L   L
Sbjct: 92  KRADAVLALLRDRGFSKTQISSLVKKRPFLLLAHPQNTLLPKLEFFYSIGASNSALARAL 151

Query: 490 ALDPEIIRRNMKDLIIPSYEFLKSVLKDDASVVSVIRRCTWLLKQDFGKNLRPNVELLRN 311
           + DP ++ R++++ IIPSY FLKS+L  D  +VS ++R TW+  +D  KNL PN+ELLR 
Sbjct: 152 SSDPTLLTRSLENQIIPSYNFLKSILLSDEKIVSALKRTTWIFLEDHSKNLIPNIELLRE 211

Query: 310 YGVPDDRIAVILKLHPRAMLQSADGFKMVVEEVKEMGFDPAKSHFITACKVKCGL-SKTM 134
            GV    I+++L   P A++Q  D F  +V+EV+EM FDP KS F+ A     G  +K++
Sbjct: 212 AGVLHSCISLLLTHFPEALMQRHDKFSKIVKEVREMEFDPKKSTFVLAVHAISGKGNKSI 271

Query: 133 WERKWDCFKKWGWSDDEILSAFMKQPNVMAFSEKKVDRVMDFLV 2
           W + ++ + +WGWS D+I +AF K P+ M  SEKK+ + MDF V
Sbjct: 272 WNKCFEVYMRWGWSKDDIFAAFKKHPHCMMLSEKKIMKAMDFFV 315


>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317131|gb|EFH47553.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 404

 Score =  186 bits (471), Expect = 5e-45
 Identities = 88/223 (39%), Positives = 142/223 (63%), Gaps = 1/223 (0%)
 Frame = -2

Query: 667 RYKSFVSIFESYGFTETQVSSLFSKRPILLQFDKNEKIKPKLEFFTKNGFSSSDLCHILA 488
           R  + +++   +GFT  Q+S+L  KRP+LL  +    + PKL FF   G S S L   LA
Sbjct: 99  RPNTVLNLLRDHGFTTAQISTLVKKRPVLLLANAESVLLPKLLFFLSIGVSKSLLARTLA 158

Query: 487 LDPEIIRRNMKDLIIPSYEFLKSVLKDDASVVSVIRRCTWLLKQDFGKNLRPNVELLRNY 308
            DP I+ R++ + +IPSY+FLKSVL  D  +V+ +RR TW+  +D  KNL PN+  +   
Sbjct: 159 SDPTILTRSLVNQLIPSYKFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMSET 218

Query: 307 GVPDDRIAVILKLHPRAMLQSADGFKMVVEEVKEMGFDPAKSHFITACKVKCGL-SKTMW 131
           GVP+  I ++L   P A++Q +  F+ + ++ +EMGF+P KS F+ A     G  +K++W
Sbjct: 219 GVPEKCIKLLLTHFPEAVMQKSHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIW 278

Query: 130 ERKWDCFKKWGWSDDEILSAFMKQPNVMAFSEKKVDRVMDFLV 2
           ++ ++ +++WGWS+D+I+ AF K P+ M  SE+K++R M+F V
Sbjct: 279 DKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEFFV 321


>emb|CAN68940.1| hypothetical protein VITISV_028995 [Vitis vinifera]
          Length = 379

 Score =  186 bits (471), Expect = 5e-45
 Identities = 89/219 (40%), Positives = 138/219 (63%)
 Frame = -2

Query: 658 SFVSIFESYGFTETQVSSLFSKRPILLQFDKNEKIKPKLEFFTKNGFSSSDLCHILALDP 479
           S +++  +YG T T +  + SK P L   D  + + PKLEFF   GFS  D+  IL+ +P
Sbjct: 63  SVLALLRNYGCTNTHIXKIVSKYPALFTTDPEKTLLPKLEFFRSVGFSGPDIAGILSSNP 122

Query: 478 EIIRRNMKDLIIPSYEFLKSVLKDDASVVSVIRRCTWLLKQDFGKNLRPNVELLRNYGVP 299
            I++R +++ +IP+Y FLKSV+  + +VV V+R+  W+  Q   K + PN+ +L   GVP
Sbjct: 123 YILKRGLQNNLIPTYTFLKSVVMVNENVVRVLRKTHWITVQSVQKAITPNIAILTEIGVP 182

Query: 298 DDRIAVILKLHPRAMLQSADGFKMVVEEVKEMGFDPAKSHFITACKVKCGLSKTMWERKW 119
              I  ++  HP A++Q+ + F   V++V EMGFDP K  F+ A +V CG+ +++WE++ 
Sbjct: 183 MSNILFLVTCHPNAVIQNREKFSTSVKKVXEMGFDPLKVSFLKAVQVICGMGESIWEQRM 242

Query: 118 DCFKKWGWSDDEILSAFMKQPNVMAFSEKKVDRVMDFLV 2
           + +K+WG +DDEI+S F   P  M  SEKK+  VMDFLV
Sbjct: 243 EVYKRWGLTDDEIMSMFRLDPLCMRSSEKKIMSVMDFLV 281


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