BLASTX nr result

ID: Cnidium21_contig00033842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033842
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446062.1| hypothetical protein SORBIDRAFT_06g001200 [S...    93   5e-17
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    90   9e-17
ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago ...    86   8e-15
ref|XP_003614922.1| TNP1 [Medicago truncatula] gi|355516257|gb|A...    84   3e-14
tpg|DAA39007.1| TPA: hypothetical protein ZEAMMB73_811988 [Zea m...    81   3e-13

>ref|XP_002446062.1| hypothetical protein SORBIDRAFT_06g001200 [Sorghum bicolor]
           gi|241937245|gb|EES10390.1| hypothetical protein
           SORBIDRAFT_06g001200 [Sorghum bicolor]
          Length = 492

 Score = 93.2 bits (230), Expect = 5e-17
 Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
 Frame = -2

Query: 578 LGYFLGTLKK---CVPLTYKSWRDVPENLKNTLLNYVKQQYFFPEELGKWVLRSINVDWR 408
           LG FLGT+ +     P+  K WR+V ++   T++ +++ ++ +P    KW+L+SI  DWR
Sbjct: 66  LGQFLGTIARNGGYCPVGAKDWREVKKHNVETIIQFIQTKFLYPRSCEKWILKSIGRDWR 125

Query: 407 GYKSRLKASHYTPYTTDEERVENTPNDIPLEDFKLLLQYWGDEDVQAKAKRNSESRQMYV 228
            YK+ LK + + P        E  P+DI  + +K L++YW   + QA +++N  SR+M  
Sbjct: 126 KYKATLKKTLFNPKKKKSVLNERCPDDINEDQWKSLIKYWKSSEGQALSEKNKISREMKK 185

Query: 227 DTHTLLVQSY 198
            THT   +SY
Sbjct: 186 TTHTAGTKSY 195


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 89.7 bits (221), Expect(2) = 9e-17
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
 Frame = -2

Query: 581 ELGYFLGTLKK---CVPLTYKSWRDVPENLKNTLLNYVKQQYFFPEELGKWVLRSINVDW 411
           +L  FLGT+ +     PLT+  W  +P+  K  +  +V+ ++        WVLRS+   W
Sbjct: 27  KLSTFLGTVARNGEMAPLTFVDWFAMPDEKKENMWQFVQTKFDIEPVCKTWVLRSLASKW 86

Query: 410 RGYKSRLKASHYTPYTTDEERVENTPNDIPLEDFKLLLQYWGDEDVQAKAKRNSESRQMY 231
           R +K++LK+ HY P+ TDEER+ +    +  E + +L+ YW  E+ Q ++ +N  +R   
Sbjct: 87  RNWKAKLKSEHYYPHKTDEERLNDRDRRVLPEQWAILISYWNSEEAQLRSAKNKANRSNQ 146

Query: 230 VDTHTLLVQSY 198
             THT   +S+
Sbjct: 147 KSTHTAGSKSF 157



 Score = 23.1 bits (48), Expect(2) = 9e-17
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 222 THTAGPKLFSQIRHK 178
           THTAG K F++IR +
Sbjct: 149 THTAGSKSFARIREE 163


>ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago truncatula]
           gi|355515367|gb|AES96990.1| hypothetical protein
           MTR_5g043940 [Medicago truncatula]
          Length = 714

 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 43/120 (35%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
 Frame = -2

Query: 581 ELGYFLGTLKKCV---PLTYKSWRDVPENLKNTLLN----YVKQQYFFPEELGKWVLRSI 423
           EL  FLGT+ +     PLT+ +W+ + +  K+ +++    YV ++Y  PE+  K V   +
Sbjct: 385 ELSSFLGTVARSADLCPLTFNNWKALVKTWKDEVIDPVWEYVNEKYIIPEKGKKDVFAIV 444

Query: 422 NVDWRGYKSRLKASHYTPYTTDEERVENTPNDIPLEDFKLLLQYWGDEDVQAKAKRNSES 243
           +  WR YK  +K +H+T Y T  ER++N P ++P EDFK LL YW D + Q  + +N+++
Sbjct: 445 SDAWRRYKYLIKKNHFTKYKTMHERLKNRPEEVPEEDFKKLLVYWRDRNSQEVSLQNAQN 504


>ref|XP_003614922.1| TNP1 [Medicago truncatula] gi|355516257|gb|AES97880.1| TNP1
           [Medicago truncatula]
          Length = 590

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
 Frame = -2

Query: 581 ELGYFLGTLKK---CVPLTYKSWRDVPENLKNTLLNYVKQQYFFPEELGKWVLRSINVDW 411
           +L  FLGTL +     PL Y +W  +PE  KN +  Y  +++    E   WV  ++   W
Sbjct: 91  DLSLFLGTLARNSTFCPLKYTNWSGMPEKNKNRVWRYANRKFILSVEARDWVETTVRDAW 150

Query: 410 RGYKSRLKASHYTPYTTDEERVENTPNDIPLEDFKLLLQYWGDEDVQAKAKRNSESRQMY 231
           R YK ++K  H+  Y    ER+++ P  +P+  F+ L ++W  E +QA A+ N+ +R   
Sbjct: 151 RRYKYKIKQHHFLKYPNMTERLKHRPPKVPIAHFRALCEFWSKEPIQALAESNARNRAQL 210

Query: 230 VDTHTLLVQSY 198
              H +  Q++
Sbjct: 211 KWLHRMGPQNF 221


>tpg|DAA39007.1| TPA: hypothetical protein ZEAMMB73_811988 [Zea mays]
          Length = 522

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
 Frame = -2

Query: 578 LGYFLGTLKK---CVPLTYKSWRDVPENLKNTLLNYVKQQYFFPEELGKWVLRSINVDWR 408
           LG FLGT+ +     P+    WR + ++   T+L  ++ ++ +P    KW+L+SI  DWR
Sbjct: 159 LGQFLGTIARNGGYCPIDVNDWRKIKKDSAETILQCIQTKFLYPRSCEKWILKSIGRDWR 218

Query: 407 GYKSRLKASHYTPYTTDEERVENTPNDIPLEDFKLLLQYWGDEDVQAKAKRNSESRQMYV 228
            YKS LK   ++P        +  P+DI  + +K L++YW   + +A +++N  S QM  
Sbjct: 219 KYKSILKKKLFSPKKKRSYLYKLCPDDIDEDQWKSLVKYWKSSEGKALSEKNKLSCQMKK 278

Query: 227 DTHT 216
            TH+
Sbjct: 279 TTHS 282


Top