BLASTX nr result

ID: Cnidium21_contig00033796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033796
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|1...   171   8e-41
ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana] ...   167   2e-39
ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability ...   164   1e-38
ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arab...   158   1e-36
dbj|BAF36320.1| hypothetical protein [Ipomoea trifida]                146   3e-33

>ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|118483555|gb|ABK93675.1|
           unknown [Populus trichocarpa]
           gi|222837597|gb|EEE75962.1| predicted protein [Populus
           trichocarpa]
          Length = 134

 Score =  171 bits (434), Expect = 8e-41
 Identities = 85/135 (62%), Positives = 107/135 (79%)
 Frame = +2

Query: 50  MDYNLAALKVTCVQLKAARQTDTQSGASLNGILFQRAWVQGILVTSPNDDGDGCYILDDG 229
           MDY+LAALK+ CVQLK A +T +Q+  +L GILFQRAW+QGILV++   DGDG  +LDDG
Sbjct: 1   MDYSLAALKLLCVQLKDASETPSQNALTLGGILFQRAWLQGILVSN---DGDGRLLLDDG 57

Query: 230 TGLIELFMIGDVRSHKFEIGMYLMVVGVFCVRDGDVLLLKVHKAVDLSAFPDREVMWYLE 409
           TG+IEL +  D R   ++ GMY+MVVG + VR G+  ++KVHK VDLSAFPDRE MWYLE
Sbjct: 58  TGVIELCLSPDFRLRHWDSGMYVMVVGGYFVRHGETPMIKVHKMVDLSAFPDREAMWYLE 117

Query: 410 VLEAYKLFYQPIMGE 454
           V+EAYKLFYQP++ E
Sbjct: 118 VMEAYKLFYQPLIEE 132


>ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20258784|gb|AAM13914.1| unknown protein [Arabidopsis
           thaliana] gi|332190163|gb|AEE28284.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 137

 Score =  167 bits (423), Expect = 2e-39
 Identities = 78/135 (57%), Positives = 103/135 (76%)
 Frame = +2

Query: 50  MDYNLAALKVTCVQLKAARQTDTQSGASLNGILFQRAWVQGILVTSPNDDGDGCYILDDG 229
           MDY+LAA+K+ C QL+ A+ T +Q+ ASL G+LFQRAW+QG+LV      GD C +LDDG
Sbjct: 1   MDYSLAAVKMLCSQLRDAKPTPSQNAASLGGVLFQRAWLQGVLVPFSGGGGDNCLVLDDG 60

Query: 230 TGLIELFMIGDVRSHKFEIGMYLMVVGVFCVRDGDVLLLKVHKAVDLSAFPDREVMWYLE 409
           TGL+EL +  D    +++ GMY+MVVGV+ VR G + LLKVHK VDLS  PDRE MWYLE
Sbjct: 61  TGLLELGLTNDFALRQWKSGMYVMVVGVYQVRTGQIPLLKVHKMVDLSVSPDREAMWYLE 120

Query: 410 VLEAYKLFYQPIMGE 454
           V++AY+LFY+P++ E
Sbjct: 121 VMDAYRLFYEPLIQE 135


>ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability protein 2 [Vitis
           vinifera] gi|297734866|emb|CBI17100.3| unnamed protein
           product [Vitis vinifera]
          Length = 134

 Score =  164 bits (416), Expect = 1e-38
 Identities = 79/135 (58%), Positives = 105/135 (77%)
 Frame = +2

Query: 50  MDYNLAALKVTCVQLKAARQTDTQSGASLNGILFQRAWVQGILVTSPNDDGDGCYILDDG 229
           MDY+LAALKV C QL+ A++T +Q+  +L G+LFQRAW+QG+LV S +DD  G ++LDDG
Sbjct: 1   MDYSLAALKVMCGQLRKAKETTSQNAFTLGGVLFQRAWLQGVLV-SVSDDAQGRFVLDDG 59

Query: 230 TGLIELFMIGDVRSHKFEIGMYLMVVGVFCVRDGDVLLLKVHKAVDLSAFPDREVMWYLE 409
           TG+I L + GD     ++IGMY+MVVG + VR G+  ++KVHK VDLS FPDRE MWYLE
Sbjct: 60  TGVIHLSLSGDFLHRNWKIGMYVMVVGGYFVRSGEPPMIKVHKIVDLSPFPDRESMWYLE 119

Query: 410 VLEAYKLFYQPIMGE 454
           V+EA++LFYQP+  E
Sbjct: 120 VIEAFRLFYQPLYEE 134


>ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arabidopsis lyrata subsp.
           lyrata] gi|297335532|gb|EFH65949.1| hypothetical protein
           ARALYDRAFT_470900 [Arabidopsis lyrata subsp. lyrata]
          Length = 136

 Score =  158 bits (399), Expect = 1e-36
 Identities = 75/135 (55%), Positives = 103/135 (76%)
 Frame = +2

Query: 50  MDYNLAALKVTCVQLKAARQTDTQSGASLNGILFQRAWVQGILVTSPNDDGDGCYILDDG 229
           MDY+LAA+K+ C QL+ A+ T +Q+  +L G+LFQRAW+QG+LV   +  GD   +LDDG
Sbjct: 1   MDYSLAAVKMLCSQLRDAKPTPSQNATALGGVLFQRAWLQGVLVPI-SGGGDNHMVLDDG 59

Query: 230 TGLIELFMIGDVRSHKFEIGMYLMVVGVFCVRDGDVLLLKVHKAVDLSAFPDREVMWYLE 409
           TGL+EL +  D    +++ GMY+MVVGV+ +R GD+ LLKVHK VDLS  PDRE MWYLE
Sbjct: 60  TGLVELGLSSDFALRQWKSGMYVMVVGVYHIRTGDIPLLKVHKMVDLSVSPDREAMWYLE 119

Query: 410 VLEAYKLFYQPIMGE 454
           V++AY+LFY+P++ E
Sbjct: 120 VMDAYRLFYEPLIQE 134


>dbj|BAF36320.1| hypothetical protein [Ipomoea trifida]
          Length = 143

 Score =  146 bits (369), Expect = 3e-33
 Identities = 74/139 (53%), Positives = 100/139 (71%), Gaps = 4/139 (2%)
 Frame = +2

Query: 50  MDYNLAALKVTCVQLKAARQ--TDTQSGASLNGILFQRAWVQGILVTSPNDDGD-GCYIL 220
           MDY+L ALK+ C  L  A +  + +Q   SL GILFQR W+QG+LV+ P+   D G ++L
Sbjct: 1   MDYSLGALKILCSHLTTATEATSHSQPAFSLGGILFQRVWLQGVLVSKPSPSNDAGRFLL 60

Query: 221 DDGTGLIELFMIGD-VRSHKFEIGMYLMVVGVFCVRDGDVLLLKVHKAVDLSAFPDREVM 397
           DDGTG+IEL + GD +++  +E+GMY+MVVG + VR      +KVHK VDLS  PDRE M
Sbjct: 61  DDGTGVIELKLSGDYLQNDAWELGMYVMVVGGYAVRKNGTSFIKVHKIVDLSPVPDREAM 120

Query: 398 WYLEVLEAYKLFYQPIMGE 454
           WYLEV+EA++LFYQP++ E
Sbjct: 121 WYLEVVEAFRLFYQPLIEE 139


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