BLASTX nr result

ID: Cnidium21_contig00033715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033715
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
emb|CBI30725.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   163   2e-38
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica...   151   6e-35
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   148   4e-34

>ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1|
            predicted protein [Populus trichocarpa]
          Length = 1188

 Score =  166 bits (420), Expect = 2e-39
 Identities = 101/201 (50%), Positives = 129/201 (64%), Gaps = 28/201 (13%)
 Frame = +3

Query: 9    KAEKCMAHILKAFEAVLGSPVKIEIKCESRVGTPTGISVPLVLPASQDRSPQVYANPGVL 188
            KAEK  AHIL+AFE+VLGSPV IEI+CES   T  G  VPL+LPAS++ S Q+  +P + 
Sbjct: 959  KAEKFRAHILQAFESVLGSPVTIEIRCESNKETSAGFRVPLILPASKNGSSQMAIDPVLN 1018

Query: 189  GINRMPIDSTG---AGRSEIVEIEASPRQPKDNGHFG-NMQSAKR--------------- 311
              +RMP   TG    GRSEIVE+  SPR+ + N     N++S++R               
Sbjct: 1019 AGSRMP--RTGDYLEGRSEIVEVPTSPRKYEGNEPTNHNVESSRRGLQHTRAGESVSNKK 1076

Query: 312  ---------IQPSEYDQNKSIVKRKVSLAHIIQQTERGSQRNGWSKRKAISIAEKLEQEN 464
                      +  E  Q+KSIV+ KVSLA +IQQ E  +Q+ GWSK KA+SIAEKLEQEN
Sbjct: 1077 PAVGSLVERRKLGETSQSKSIVRSKVSLARVIQQAEGCTQQAGWSKHKAVSIAEKLEQEN 1136

Query: 465  LRLEPRSRSYLCWKASKLTRK 527
            LRLEPRSR  LCWKA+++TR+
Sbjct: 1137 LRLEPRSRCLLCWKATRVTRR 1157


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  163 bits (412), Expect = 2e-38
 Identities = 96/185 (51%), Positives = 118/185 (63%), Gaps = 10/185 (5%)
 Frame = +3

Query: 3    QSKAEKCMAHILKAFEAVLGSPVKIEIKCESRVGTPTGISVPLVLPASQDRSPQVYANPG 182
            +SKAEK   HIL+AFE++LGSPV IEI+ ESR     G  VPL+  A++D   Q+  N  
Sbjct: 716  KSKAEKYRGHILRAFESILGSPVTIEIRSESRKDAKAGAHVPLIFSAAKDLPSQMLLNAN 775

Query: 183  VLGINRMPIDSTGAGRSEIVEIEASPRQPKDNGHFGNMQSAKRIQP----------SEYD 332
             L +          GRSEIVEI  SPR+   N   G   S+ R              E  
Sbjct: 776  SLEM----------GRSEIVEILPSPREL--NSWAGEASSSHRKSTMASVPERRKFGEQS 823

Query: 333  QNKSIVKRKVSLAHIIQQTERGSQRNGWSKRKAISIAEKLEQENLRLEPRSRSYLCWKAS 512
             ++S+V+ KVSLAH+IQQ E  SQR+GW+KRKA+SIAEKLEQENLRLEPRSRS LCWKAS
Sbjct: 824  HSQSLVRSKVSLAHVIQQAEGCSQRSGWTKRKAVSIAEKLEQENLRLEPRSRSLLCWKAS 883

Query: 513  KLTRK 527
            K+TR+
Sbjct: 884  KVTRR 888


>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  163 bits (412), Expect = 2e-38
 Identities = 103/230 (44%), Positives = 128/230 (55%), Gaps = 55/230 (23%)
 Frame = +3

Query: 3    QSKAEKCMAHILKAFEAVLGSPVKIEIKCESRVGTPTGISVPLVLPASQDRSPQVYANPG 182
            +SKAEK   HIL+AFE++LGSPV IEI+ ESR     G  VPL+  A++D   Q+  N G
Sbjct: 901  KSKAEKYRGHILRAFESILGSPVTIEIRSESRKDAKAGAHVPLIFSAAKDLPSQMVTNRG 960

Query: 183  VLGINR-----------------------------MPIDSTGAGRSEIVEIEASPRQPKD 275
             +  NR                             +  +S   GRSEIVEI  SPR+ K 
Sbjct: 961  NITDNRRHQAGYDDINQRVPKDRDFHGGGSAQGQLLNANSLEMGRSEIVEILPSPRELKS 1020

Query: 276  NGHF-GNMQSAK-------------------------RIQPSEYDQNKSIVKRKVSLAHI 377
            N H   N+QS K                         R +  E   ++S+V+ KVSLAH+
Sbjct: 1021 NDHVDNNVQSDKTGLESSWAGEASSSHRKSTMASVPERRKFGEQSHSQSLVRSKVSLAHV 1080

Query: 378  IQQTERGSQRNGWSKRKAISIAEKLEQENLRLEPRSRSYLCWKASKLTRK 527
            IQQ E  SQR+GW+KRKA+SIAEKLEQENLRLEPRSRS LCWKASK+TR+
Sbjct: 1081 IQQAEGCSQRSGWTKRKAVSIAEKLEQENLRLEPRSRSLLCWKASKVTRR 1130


>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
            gi|355482867|gb|AES64070.1| DNA polymerase III subunit
            gamma/tau [Medicago truncatula]
          Length = 1177

 Score =  151 bits (381), Expect = 6e-35
 Identities = 96/200 (48%), Positives = 123/200 (61%), Gaps = 25/200 (12%)
 Frame = +3

Query: 3    QSKAEKCMAHILKAFEAVLGSPVKIEIKCESRVGTPTGISVPLVLPASQDRSPQVYANPG 182
            +S AEK   HIL+AFE+VLGS V IEI+CE+     + + +PLVLP+  D S QV     
Sbjct: 958  KSTAEKFTGHILQAFESVLGSSVTIEIRCEANKDAGSPVQLPLVLPSINDGSSQVRDLND 1017

Query: 183  VLGINRMPIDSTGAGRSEIVEIEASPRQPKDN-----GH----------FGNMQSAKRI- 314
            V          T   RSEIVE EAS  + K+N     GH           G + +++++ 
Sbjct: 1018 V---------GTEKRRSEIVEEEASHMEHKNNEQQVDGHATYKNQDGTSMGQVLASQKVP 1068

Query: 315  ---------QPSEYDQNKSIVKRKVSLAHIIQQTERGSQRNGWSKRKAISIAEKLEQENL 467
                     + SE  Q++S+VK KVSLAH+IQ+ E   QR+GWSKRKA+SIAEKLEQENL
Sbjct: 1069 IVKSHLVRRKLSEQSQSRSLVKSKVSLAHVIQRAE--GQRSGWSKRKAVSIAEKLEQENL 1126

Query: 468  RLEPRSRSYLCWKASKLTRK 527
            RLEPRSRS LCWKAS+ TR+
Sbjct: 1127 RLEPRSRSLLCWKASRATRR 1146


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  148 bits (374), Expect = 4e-34
 Identities = 93/202 (46%), Positives = 120/202 (59%), Gaps = 27/202 (13%)
 Frame = +3

Query: 3    QSKAEKCMAHILKAFEAVLGSPVKIEIKCESRVGTPTGISVPLVLPASQDRSPQVYANPG 182
            +S AEK   HIL+AFE+VLGS + IEI+CE    T + +  PL LP++ D S Q+    G
Sbjct: 961  KSTAEKFRGHILQAFESVLGSSITIEIRCELNKDTASAVQQPLTLPSTNDSSSQIRDFNG 1020

Query: 183  VLGINRMPI-DSTGAGRSEIVEIEASPRQPKDN---------------GHFGNMQSAKRI 314
            V  +    + DS    R EIVE  AS  + K++               G      SA + 
Sbjct: 1021 VGTLAHPSVTDSVEKRRGEIVEEAASQVEQKNSKQQVDAHGTSYKSLEGTSIGQSSASQK 1080

Query: 315  QP-----------SEYDQNKSIVKRKVSLAHIIQQTERGSQRNGWSKRKAISIAEKLEQE 461
            +P            E  Q++S+V+ KVSLAH+IQQ E   QR+GWSKRKA+SIAEKLEQE
Sbjct: 1081 KPIVKSHLDQRKLMEQGQSRSLVRSKVSLAHVIQQAE--GQRSGWSKRKAVSIAEKLEQE 1138

Query: 462  NLRLEPRSRSYLCWKASKLTRK 527
            NLRLEPRSRS LCWKAS++TR+
Sbjct: 1139 NLRLEPRSRSLLCWKASRVTRR 1160


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