BLASTX nr result

ID: Cnidium21_contig00033694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033694
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   294   7e-78
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   279   2e-73
ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2...   279   2e-73
ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   273   1e-71
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   272   2e-71

>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  294 bits (752), Expect = 7e-78
 Identities = 133/181 (73%), Positives = 161/181 (88%)
 Frame = +1

Query: 1   VDHWNAMIGGLAIHGLGEVAFGLFIEMERLYVQPDDITFIGVLNACGHSGMVKEGMICFE 180
           +DHWNA+IGGLAIHGLGEVAF LF+EME+L+V+PDDITFIGVLNAC H+G+VKEG++CFE
Sbjct: 417 IDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFE 476

Query: 181 MMRRIHKLEPKLQHYGCMVDILGRAGYIEEAAKFIQDMPIEPNDVVWRTLLSACKSYENL 360
           +MRR+HK+EPKLQHYGCMVDILGRAG++EEA KF++ MPIEPNDVVWRTLLSAC+++EN 
Sbjct: 477 LMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENF 536

Query: 361 NIGEQVAKYLIQRDPHNSGSYVLLSNIYASFSMWDCVRNVRTRMKERELEKVPGCSWIEL 540
            IGE VAK+LI  D +N  SYVLLSNIYA F MW+ V  +R  MK+R+L+K+PGCS IEL
Sbjct: 537 TIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIEL 596

Query: 541 E 543
           E
Sbjct: 597 E 597


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  279 bits (714), Expect = 2e-73
 Identities = 126/181 (69%), Positives = 156/181 (86%)
 Frame = +1

Query: 1    VDHWNAMIGGLAIHGLGEVAFGLFIEMERLYVQPDDITFIGVLNACGHSGMVKEGMICFE 180
            +DHWNA++ GLAIHGLGEVAF LF+EME+L+V+P+DITFIGVLNAC H+G+VKEG++ F 
Sbjct: 463  IDHWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLNACNHAGLVKEGLMXFX 522

Query: 181  MMRRIHKLEPKLQHYGCMVDILGRAGYIEEAAKFIQDMPIEPNDVVWRTLLSACKSYENL 360
            +MR +HK+EPKLQHYGCMVDILGRAG++EE  KF++ MPIEPNDVVWRTLLSAC+++EN 
Sbjct: 523  LMRXVHKVEPKLQHYGCMVDILGRAGHVEEXKKFVEKMPIEPNDVVWRTLLSACRNHENF 582

Query: 361  NIGEQVAKYLIQRDPHNSGSYVLLSNIYASFSMWDCVRNVRTRMKERELEKVPGCSWIEL 540
             IGE VAK+LI  D +N  SYVLLSNIYA F MW+ V  +R  MK+R+L+K+PGCS IEL
Sbjct: 583  TIGEPVAKHLISVDSYNPSSYVLLSNIYAXFGMWNDVYRIRMMMKQRDLKKIPGCSQIEL 642

Query: 541  E 543
            E
Sbjct: 643  E 643


>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  279 bits (713), Expect = 2e-73
 Identities = 123/181 (67%), Positives = 156/181 (86%)
 Frame = +1

Query: 1   VDHWNAMIGGLAIHGLGEVAFGLFIEMERLYVQPDDITFIGVLNACGHSGMVKEGMICFE 180
           VDHWNA+IGGLAIHGLGE+AF   +EMER+ V+PDDITFIG+LNACGH+G+VKEGM+CFE
Sbjct: 422 VDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFE 481

Query: 181 MMRRIHKLEPKLQHYGCMVDILGRAGYIEEAAKFIQDMPIEPNDVVWRTLLSACKSYENL 360
           +MRR+HK+EPKLQHYGCMVDILGRAG+IEEA  F+++MP EPNDV+WR+LLSACK++E+ 
Sbjct: 482 LMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESF 541

Query: 361 NIGEQVAKYLIQRDPHNSGSYVLLSNIYASFSMWDCVRNVRTRMKERELEKVPGCSWIEL 540
           N+G+ VA+ L++ D  +  SYVL SN+YA    W+ VR VR  MK++ L+K+PGCSWIEL
Sbjct: 542 NVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIEL 601

Query: 541 E 543
           E
Sbjct: 602 E 602


>ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g45350, chloroplastic-like [Vitis vinifera]
          Length = 704

 Score =  273 bits (699), Expect = 1e-71
 Identities = 123/181 (67%), Positives = 156/181 (86%)
 Frame = +1

Query: 1   VDHWNAMIGGLAIHGLGEVAFGLFIEMERLYVQPDDITFIGVLNACGHSGMVKEGMICFE 180
           +DHWNA++ GLAIHGLGEVAF LF+EME+L+V+P+DITFIGVLNAC H+G+VKEG++CFE
Sbjct: 410 IDHWNAILSGLAIHGLGEVAFELFMEMEKLFVKPNDITFIGVLNACNHAGLVKEGLMCFE 469

Query: 181 MMRRIHKLEPKLQHYGCMVDILGRAGYIEEAAKFIQDMPIEPNDVVWRTLLSACKSYENL 360
           +M+R+ K+EPKLQHY CMVDILG+AG++EE  KF++ M IEPNDVVWRTLLSAC+++EN 
Sbjct: 470 LMKRVDKVEPKLQHYVCMVDILGQAGHVEETKKFVEKMSIEPNDVVWRTLLSACRNHENF 529

Query: 361 NIGEQVAKYLIQRDPHNSGSYVLLSNIYASFSMWDCVRNVRTRMKERELEKVPGCSWIEL 540
            IGE VAK+LI  D +N  SYVLLSNIYA F +W+ V  +R  MK+R+L+K+PGCS IEL
Sbjct: 530 TIGEPVAKHLISVDSYNLSSYVLLSNIYAGFGIWNDVHRIRMMMKQRDLKKIPGCSQIEL 589

Query: 541 E 543
           E
Sbjct: 590 E 590


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
           gi|449480068|ref|XP_004155790.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  272 bits (696), Expect = 2e-71
 Identities = 122/181 (67%), Positives = 151/181 (83%)
 Frame = +1

Query: 1   VDHWNAMIGGLAIHGLGEVAFGLFIEMERLYVQPDDITFIGVLNACGHSGMVKEGMICFE 180
           +DHWNAMI G+A +GLG++AFG+ +EM RL V+PD ITFIGVLNAC H+G+VKEG+ICFE
Sbjct: 420 IDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFE 479

Query: 181 MMRRIHKLEPKLQHYGCMVDILGRAGYIEEAAKFIQDMPIEPNDVVWRTLLSACKSYENL 360
           +MR++HKLEPKLQHYGCMVDILG+AG +E A KFI++MPIEPND++WRTLLSAC+++EN 
Sbjct: 480 LMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENF 539

Query: 361 NIGEQVAKYLIQRDPHNSGSYVLLSNIYASFSMWDCVRNVRTRMKERELEKVPGCSWIEL 540
            IGE +AK+L+  D  NS SYVLLSNIYA   +W     VR  MK++ L KVPGCSWIEL
Sbjct: 540 TIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIEL 599

Query: 541 E 543
           E
Sbjct: 600 E 600


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