BLASTX nr result

ID: Cnidium21_contig00033635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033635
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...   364   2e-98
ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|2...   353   3e-95
ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containin...   350   2e-94
ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin...   348   1e-93
ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containin...   348   1e-93

>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
           gi|223538607|gb|EEF40210.1| RING finger protein 113A,
           putative [Ricinus communis]
          Length = 325

 Score =  364 bits (934), Expect = 2e-98
 Identities = 185/275 (67%), Positives = 209/275 (76%), Gaps = 3/275 (1%)
 Frame = +1

Query: 130 MAESSDPPRQPESVCTFFKKPTKNKNIRKRNFXXXXXXXXXXXXXXXTLMFNRKKSSVPD 309
           MA+S     QPE VC FF+KP KNKNIRKR                 +L+ N+KK+  PD
Sbjct: 1   MADSGQS-EQPEPVCNFFRKPLKNKNIRKRTIEKDEEDDNSKTES--SLLHNQKKAPKPD 57

Query: 310 NKLHFSTAPTKQ-LTSSDVETKKEQTLFQFESSSEIQVQNDSRATATLETETDFSRDARA 486
           NKL+FST P+K  L++++   + ++ +FQFESS EIQVQ+DSRATATLETET+FS+DARA
Sbjct: 58  NKLYFSTGPSKNSLSAAESVVESDRPVFQFESSKEIQVQHDSRATATLETETEFSKDARA 117

Query: 487 IRERVLKQAEAALKGKNKGEGDEKLYKGMNAYTDHKAGFRREQTVAGEKAGGSHGPLRAS 666
           IRER LKQAE ALKGK    GD KLYKG++ YTDHKAGFRREQT++ EKAGGSHGPLRAS
Sbjct: 118 IRERALKQAEEALKGKTLSSGDAKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRAS 177

Query: 667 AHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEKEKARKRN 846
           AHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDE EK RKRN
Sbjct: 178 AHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRN 237

Query: 847 LALKQL--XXXXXXXXXXXXXXXLPFACFICRQPF 945
           LAL +L                 LPFACFICRQPF
Sbjct: 238 LALGELEGGTGENEEEDDDDEHELPFACFICRQPF 272


>ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|222861631|gb|EEE99173.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  353 bits (907), Expect = 3e-95
 Identities = 179/266 (67%), Positives = 203/266 (76%), Gaps = 1/266 (0%)
 Frame = +1

Query: 151 PRQPESVCTFFKKPTKNKNIRKRNFXXXXXXXXXXXXXXXTLMFNRKKSSVPDNKLHFST 330
           P+Q E+VC FF+KP KNKNIRKR                 +L+ ++KK+   DNKL+FST
Sbjct: 9   PQQTEAVCNFFRKPMKNKNIRKRMIDEDEDEDSKTQT---SLLHSQKKAPKADNKLYFST 65

Query: 331 APTKQLTSSDVETKKEQTLFQFESSSEIQVQNDSRATATLETETDFSRDARAIRERVLKQ 510
            P K+ + S+ E   E+ LFQFESS EIQVQ+DSRATATLETET+FS+DARAIRER LKQ
Sbjct: 66  GPLKKSSESNAEP--ERLLFQFESSKEIQVQHDSRATATLETETEFSKDARAIRERALKQ 123

Query: 511 AEAALKGKNKGEGDEKLYKGMNAYTDHKAGFRREQTVAGEKAGGSHGPLRASAHIRVSAR 690
           A+ ALKGK    GDEKLYKG++ YTDHKAGFRREQT++ EKAGGSHGPLRASAHIRVSAR
Sbjct: 124 ADDALKGKKMSSGDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSAR 183

Query: 691 FDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEKEKARKRNLAL-KQLX 867
           FDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQ+EKEW+E EKARKRNLAL     
Sbjct: 184 FDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEKEWEEAEKARKRNLALGMDDE 243

Query: 868 XXXXXXXXXXXXXXLPFACFICRQPF 945
                         LPFACFICR+ F
Sbjct: 244 EVGGAGHDDDDEDELPFACFICRENF 269


>ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 300

 Score =  350 bits (899), Expect = 2e-94
 Identities = 173/263 (65%), Positives = 200/263 (76%), Gaps = 2/263 (0%)
 Frame = +1

Query: 163 ESVCTFFKKPTKNKNIRKRNFXXXXXXXXXXXXXXXTLMFNRKKSSVPDNKLHFSTAPTK 342
           E VC+FF+KPTKNKNIRKR                 + + N+KK+   ++KL+FS+ P+K
Sbjct: 11  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAET---SFLLNQKKAPKTESKLYFSSGPSK 67

Query: 343 QLTSSDVETKKEQTLFQFESSSEIQVQNDSRATATLETETDFSRDARAIRERVLKQAEAA 522
             +S++   +  + +FQFESS EIQV +DSRATATLETETDFSRDARAIRERVLKQAE A
Sbjct: 68  NSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEA 127

Query: 523 LKGKNKGEGDEKLYKGMNAYTDHKAGFRREQTVAGEKAGGSHGPLRASAHIRVSARFDYQ 702
           LKGK KG G EKLYKG+NAY D+KAGFRRE T++ EKAGG+HGPLRASAHIR SARFDYQ
Sbjct: 128 LKGKGKGSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQ 187

Query: 703 PDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEKEKARKRNLALK--QLXXXX 876
           PDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQLEKEW+E EKARKR LA+K        
Sbjct: 188 PDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDT 247

Query: 877 XXXXXXXXXXXLPFACFICRQPF 945
                      LPFACFICR+PF
Sbjct: 248 SEQSDEDEEDALPFACFICREPF 270


>ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 322

 Score =  348 bits (893), Expect = 1e-93
 Identities = 172/263 (65%), Positives = 199/263 (75%), Gaps = 2/263 (0%)
 Frame = +1

Query: 163 ESVCTFFKKPTKNKNIRKRNFXXXXXXXXXXXXXXXTLMFNRKKSSVPDNKLHFSTAPTK 342
           E VC+FF+KPTKNKNIRKR                 + + N+KK+   ++KL+FS+ P+K
Sbjct: 11  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAET---SFLLNQKKAPKTESKLYFSSGPSK 67

Query: 343 QLTSSDVETKKEQTLFQFESSSEIQVQNDSRATATLETETDFSRDARAIRERVLKQAEAA 522
             +S++   +  + +FQFESS EIQV +DSRATATLETETDFSRDARAIRERVLKQAE A
Sbjct: 68  NSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEA 127

Query: 523 LKGKNKGEGDEKLYKGMNAYTDHKAGFRREQTVAGEKAGGSHGPLRASAHIRVSARFDYQ 702
           LKGK K  G EKLYKG+NAY D+KAGFRRE T++ EKAGG+HGPLRASAHIR SARFDYQ
Sbjct: 128 LKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQ 187

Query: 703 PDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEKEKARKRNLALK--QLXXXX 876
           PDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQLEKEW+E EKARKR LA+K        
Sbjct: 188 PDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDT 247

Query: 877 XXXXXXXXXXXLPFACFICRQPF 945
                      LPFACFICR+PF
Sbjct: 248 SEQSDEDEEDALPFACFICREPF 270


>ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Vitis
           vinifera] gi|297745423|emb|CBI40503.3| unnamed protein
           product [Vitis vinifera]
          Length = 331

 Score =  348 bits (893), Expect = 1e-93
 Identities = 177/266 (66%), Positives = 202/266 (75%), Gaps = 2/266 (0%)
 Frame = +1

Query: 154 RQPESVCTFFKKPTKNKNIRKRNFXXXXXXXXXXXXXXXTLMFNRKKSSVPDNKLHFSTA 333
           +Q E VC FF+KPTKNKNIRKR                 +++  +KK   PDNKL+FST 
Sbjct: 19  QQSEPVCNFFRKPTKNKNIRKRTHDEDENEDSKTGT---SVLHQQKKPPKPDNKLYFSTG 75

Query: 334 PTKQLTSSDVETKKEQTLFQFESSSEIQVQNDSRATATLETETDFSRDARAIRERVLKQA 513
            +++ T  D   K+ + +FQFESS EIQVQ+DSRATATLETETDFSRDARAIRERVLKQ+
Sbjct: 76  SSRKSTM-DEPNKESEPIFQFESSKEIQVQHDSRATATLETETDFSRDARAIRERVLKQS 134

Query: 514 EAALKGKNKGEGDEKLYKGMNAYTDHKAGFRREQTVAGEKAGGSHGPLRASAHIRVSARF 693
           + ALKGKNK   DEKLYKG++ YTD+KAGFRREQTVA EKAGG+HGPLRASAHIR SARF
Sbjct: 135 QDALKGKNKS--DEKLYKGIHGYTDYKAGFRREQTVASEKAGGAHGPLRASAHIRASARF 192

Query: 694 DYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEKEKARKRNLAL--KQLX 867
           DYQPDICKDYKETGYCG+GD+CKFMHDRGDYKSGWQ+EKEW+E EKARKRNLA+      
Sbjct: 193 DYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEKEWEEAEKARKRNLAMGGDDAD 252

Query: 868 XXXXXXXXXXXXXXLPFACFICRQPF 945
                         LPFACFICRQPF
Sbjct: 253 EGGGGQSDEDDDDALPFACFICRQPF 278


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